Regular ArticleClassification and Phylogenetic Relationships of African Tilapiine Fishes Inferred from Mitochondrial DNA Sequences
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2024, Science of the Total EnvironmentComparative rapid identification of Salmo salar, Oncorhynchus mykiss, and Oncorhynchus keta components based on loop-mediated isothermal amplification and quantitative polymerase chain reaction
2022, AquacultureCitation Excerpt :Actually, the marker mtDNA CR has been previously selected and successfully amplified for the determination of fish, for example, tilapia species that existed in Hawaii have been identified and the genetic diversity of Salmo trutta in Serbia has been closely examined using mtDNA CR as a DNA marker system (Wu and Yang, 2012; Marić et al., 2006). Moreover, mtDNA CR has also been used for classification and describing phylogenic relationships of 42 tilapiine species originated from Africa (Nagl et al., 2001). The mtDNA CR is considered to be the most variable section of mtDNA, with two to five times higher rates of nucleotide substitution than the protein-coding regions (Sato et al., 2001).
Application of microsatellite genotyping by amplicon sequencing for delimitation of African tilapiine species relevant for aquaculture
2021, AquacultureCitation Excerpt :The genus Oreochromis is the largest followed by Sarotherodon with over 40 and 13 species respectively (Fuller et al. 1998). The genus Tilapia has four species, although more might still be undescribed (Nagl et al. 2001). In general, morphological characteristics and reproductive biology have been used to differentiate and characterize species and genera of tilapiine species (Nagl et al. 2001; Ndiwa et al. 2016).
Molecular phylogeny of Oreochromis (Cichlidae: Oreochromini) reveals mito-nuclear discordance and multiple colonisation of adverse aquatic environments
2019, Molecular Phylogenetics and EvolutionCitation Excerpt :Alcolapia is consistently resolved within Oreochromis irrespective of dataset and forms a strongly supported clade with O. amphimelas and O. esculentus irrespective of nuclear analyses performed. All previous phylogenetic studies including the two genera have also resolved Alcolapia within Oreochromis, albeit with less comprehensive sampling of either genus (Seegers et al., 1999; Nagl et al., 2001; Schwarzer et al., 2009; Dunz and Schliewen, 2013; Kavembe et al., 2013; Matschiner et al., 2017; Rabosky et al., 2018). However, the sister group of Alcolapia is contentious, as O. amphimelas is strongly supported as its sister group based on concatenated nuclear analyses, whereas, species tree analyses placed O. esculentus as sister, albeit with weak support.