Skip to main content

Part of the book series: Methods in Molecular Medicineā„¢ ((MIMM,volume 114))

  • 502 Accesses

Abstract

Allergy affects more than 25% of Western populations (1) and is estimated to be the sixth leading cause of chronic disease in the United States and Western Europe. The complexity of the condition is such that hundreds of common allergens have been described, and in order to maximize diagnostic efficiency there is an urgent clinical requirement for assays to provide multiple-allergen determination in a timely and cost-effective manner. Miniaturized immunoassays that utilize protein microarray technology now offer the possibility of circumventing most of the current limitations in the serodiagnosis of allergic disease. The heterogeneous nature of allergens presents many challenges in all aspects of developing such arrays, from immobilization of the capture molecule to detection of the bound ligand. In addition, there is no simple method of protein amplification (such as PCR for nucleic acids), and stabilization is yet a further major consideration. Notwithstanding these challenges, protein microarrays have been developed for the serodiagnosis of allergies and other complex clinical conditions. These assays exhibit good analytical and clinical performance and deliver significant advantages in convenience and cost compared with traditional ELISA test formats. This chapter details the techniques employed in the construction and processing of an allergen array specific for the serodiagnosis of allergic disease. An overview of protein microarray technology is provided and the principles that underpin the suitability for use of this technology in the identification and measurement of particular proteins in patient sera (serum profiling) are discussed.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Hiller, R., Laffer, S., Harwanegg, C., et al. (2002) Microarrayed allergen molecules: diagnostic gatekeepers for allergy treatment. FASEB J. 16, 414ā€“416.

    PubMedĀ  CASĀ  Google ScholarĀ 

  2. Brown, P. O. and Botstein, D. (1999) Exploring the new world of the genome with DNA microarrays. Nat. Genet. 21, 33ā€“37.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  3. Cutler, P. (2003) Protein arrays: the current state-of-the-art. Proteomics 3, 3ā€“18.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  4. MacBeath, G. (2002) Protein microarrays and proteomics. Nat. Genet. 32, 526ā€“532.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  5. Wang, D., Liu, S., Trummer, B. J., et al. (2002) Carbohydrate microarrays for the recognition of cross-reactive molecular markers of microbes and host cells. Nat. Biotechnol. 20, 275ā€“281.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  6. Willats, W. G., Rasmussen, S. E., Kristensen, T., et al. (2002) Sugar-coated microarrays: a novel slide surface for the high-throughput analysis of glycans. Proteomics 2, 1666ā€“1671.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  7. Zhu, H. and Snyder, M. (2003) Protein chip technology. Curr. Opin. Chem. Biol. 7, 55ā€“63.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  8. Zhu, H., Biglin, M., Bangham, R., et al. (2001) Global analysis of protein activities using proteome chips. Science 293, 2101ā€“2105.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  9. Bacarese-Hamilton, T., Bistoni, F., and Crisanti, A. (2002) Protein microarrays: from serodiagnosis to whole proteome scale analysis of the immune response against pathogenic microorganisms. Biotechniques 33, S24ā€“S29.

    Google ScholarĀ 

  10. Stoll, D., Templin, M. F., Schrenk, M., et al. (2002) Protein microarray technology. Front. Biosci. 7, 13ā€“32.

    ArticleĀ  Google ScholarĀ 

  11. Kusnezow, W. and Hoheisel, J. (2002) Antibody microarrays: promises and problems. Biotechniques 33, S14ā€“S23.

    Google ScholarĀ 

  12. Schena, M., Shalon, D., Davis, R. W., et al. (1995) Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270, 467ā€“470.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  13. Okamoto, T., Suzuki, T. and Yamamoto, N. (2000) Microarray fabrication with covalent attachment of DNA using bubble jet technology. Nat. Biotechnol. 18, 438ā€“441.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  14. Davies, C. (2001) Introduction to immunoassay principles, in The Immunoassay Handbook, 2nd ed. (Wild, D. ed.), Nature Publishing Group, London, pp. 3ā€“40.

    Google ScholarĀ 

  15. Pawlak, M., Schick, E., Bopp, M. A., et al. (2002) Zeptosensā€™ protein microarrays: a novel high performance microarray platform for low abundance protein analysis. Proteomics 2, 383ā€“393.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  16. Wu, G., Datar, R. H., Hansen, K. M., et al. (2001) Bioassay of prostate-specific antigen (PSA) using microcantilevers. Nat. Biotechnol. 19, 856ā€“860.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  17. Pastinen, T. (2003) Single nucleotide polymorphism genotyping using microarrays, in Microarrays & Microplates: Applications in Biomedical Sciences (Ye, S. and Day, I. N. M., eds.), BIOS, Oxford, UK, pp. 89ā€“108.

    Google ScholarĀ 

  18. Wiltshire, S., Oā€™Malley, S., Lambert, J., et al. (2000) Detection of multiple allergenspecific IgEā€™s on microarrays by immunoassay with rolling circle amplification. Clin. Chem. 46, 1990ā€“1993.

    PubMedĀ  CASĀ  Google ScholarĀ 

  19. Mendoza, L. G., McQuary, P., Mongan, A., et al. (1999) High-throughput microarraybased enzyme-linked immunosorbent assay (ELISA). Biotechniques 27, 778ā€“788.

    PubMedĀ  CASĀ  Google ScholarĀ 

  20. Weinberger, S. R., Morris, T. S., and Pawlak, M. (2000) Recent trends in protein biochip technology. Pharmacogenetics 1, 395ā€“416.

    CASĀ  Google ScholarĀ 

  21. Brockman, J. M., Nelson, B. P., and Corn, R. M. (2000) Surface plasmon resonance imaging measurements of ultrathin organic films. Annu. Rev. Phys. Chem. 51, 41ā€“63.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  22. Ekins, R. P. (1989) Multi-analyte immunoassay. J. Pharmacol. Biomed. Anal. 7, 155ā€“168.

    ArticleĀ  CASĀ  Google ScholarĀ 

  23. Ekins, R. P., Chu, F. W., and Biggart, E. (1990) Multispot, multianalyte, immunoassay. Ann. Biol. Clin. (Paris) 48, 655ā€“666.

    CASĀ  Google ScholarĀ 

  24. Ekins, R. P. and Chu, F. W. (1991) Multianalyte microspot immunoassayā€”microanalytical ā€œcompact diskā€ of the future. Clin. Chem. 37, 1995ā€“1967.

    Google ScholarĀ 

  25. Engvall, E. and Perlmann, P. (1971) Enzyme linked immunosorbent assay (ELISA). Quantitative assay of immunoglobulin G. Immunochemistry 8, 871ā€“874.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  26. Walter, G., Bussow, K., Cahill, D., et al. (2000) Protein arrays for gene expression and molecular interaction screening. Curr. Opin. Microbiol. 3, 298ā€“302.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  27. Bacarese-Hamilton, T., Mezzasoma, L., Ingham, C., et al. (2002) Detection of allergen-specific IgE on microarrays by use of signal amplification techniques. Clin. Chem. 48, 1367ā€“1370.

    PubMedĀ  CASĀ  Google ScholarĀ 

  28. Joos, T. O., Schrenk, M., Hopfl, P., et al. (2000) A microarray enzyme-linked immunosorbent assay for autoimmune diagnostics. Electrophoresis 21, 2641ā€“2650.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  29. Robinson, W. H., DiGennaro, C., Hueber, W., et al. (2002) Autoantigen microarrays for multiplex characterization of autoantibody responses. Nat. Med. 8, 295ā€“301.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  30. Mezzasoma, L., Bacarese-Hamilton, T., Ingham, C., et al. (2002) Antigen microarrays for serodiagnosis of infectious diseases. Clin. Chem. 48, 121ā€“130.

    PubMedĀ  CASĀ  Google ScholarĀ 

  31. Wiese, R., Belosludtsev, Y., Powdrill, T., et al. (2001) Simultaneous multianalyte ELISA performed on a microarray platform. Clin. Chem. 47, 1451ā€“1457.

    PubMedĀ  CASĀ  Google ScholarĀ 

  32. Miller, J. C., Zhou, H., Kwekel, J., et al. (2003) Antibody microarray profiling of human prostate cancer sera: Antibody screening and identification of potential biomarkers. Proteomics 3, 56ā€“63.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  33. Lacour, M. (1994) Acute infections in atopic dermatitis: a clue for a pathogenic role of a Th1/Th2 imbalance? Dermatology 188, 255ā€“257.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  34. Brown, W. G., Halonen, M. J., Kaltenborn, W. T., et al. (1979) The relationship of respiratory allergy, skin test reactivity, and serum IgE in a community population sample. J. Allergy Clin. Immunol. 63, 328ā€“335.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  35. Shriver-Lake, L. (1998) Silane-modified surfaces for biomaterial immobilization, in Immobilized Biomolecules in Analysis (Cass, T. and Ligler, F., eds.), Oxford University Press, Oxford, pp. 1ā€“14.

    Google ScholarĀ 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

Ā© 2005 Humana Press Inc.

About this protocol

Cite this protocol

Bacarese-Hamilton, T., Gray, J., Ardizzoni, A., Crisanti, A. (2005). Allergen Microarrays. In: Joos, T.O., Fortina, P. (eds) Microarrays in Clinical Diagnostics. Methods in Molecular Medicineā„¢, vol 114. Humana Press. https://doi.org/10.1385/1-59259-923-0:195

Download citation

  • DOI: https://doi.org/10.1385/1-59259-923-0:195

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-394-7

  • Online ISBN: 978-1-59259-923-3

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics