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Cis association of Ly49A with MHC class I restricts natural killer cell inhibition

Abstract

Natural killer (NK) cell function is negatively regulated by inhibitory receptors interacting with major histocompatibility complex class I molecules expressed on target cells. Here we show that the inhibitory Ly49A NK cell receptor not only binds to its H-2Dd ligand expressed on potential target cells (in trans) but also is constitutively associated with H-2Dd in cis (on the same cell). Cis association and trans interaction occur through the same binding site. Consequently, cis association restricts the number of Ly49A receptors available for binding of H-2Dd on target cells and reduces NK cell inhibition through Ly49A. By lowering the threshold at which NK cell activation exceeds NK cell inhibition, cis interaction allows optimal discrimination of normal and abnormal host cells.

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Figure 1: Ly49A function on H-2Dd-expressing NK cells.
Figure 2: Ly49A function in NK cells from H-2Dd mosaic mice.
Figure 3: MHC class I dependence of Ly49A staining with H-2Dk multimers.
Figure 4: MHC-dependence of H-2Dk multimer staining to Ly49A transfectants.
Figure 5: Ly49A and H-2Dd are associated in the plane of the NK cell membrane.
Figure 6: Ly49A and H-2Dd are physically associated in cis.
Figure 7: Ly49A–H-2Dd interaction in cis and in trans uses an identical binding site.
Figure 8: Induced-self reactivity of Ly49A NK cells.
Figure 9: Model for cis and trans interaction of Ly49A.

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References

  1. Arase, H., Mocarski, E.S., Campbell, A.E., Hill, A.B. & Lanier, L.L. Direct recognition of cytomegalovirus by activating and inhibitory NK cell receptors. Science 296, 1323–1326 (2002).

    Article  CAS  Google Scholar 

  2. Smith, H.R. et al. Recognition of a virus-encoded ligand by a natural killer cell activation receptor. Proc. Natl. Acad. Sci. USA 99, 8826–8831 (2002).

    Article  CAS  Google Scholar 

  3. Ljunggren, H.G. & Kärre, K. In search of the 'missing self': MHC molecules and NK cell recognition. Immunol. Today 11, 237–244 (1990).

    Article  CAS  Google Scholar 

  4. Bauer, S. et al. Activation of NK cells and T cells by NKG2D, a receptor for stress-inducible MICA. Science 285, 727–729 (1999).

    Article  CAS  Google Scholar 

  5. Karlhofer, F.M., Ribaudo, R.K. & Yokoyama, W.M. MHC class I alloantigen specificity of Ly-49+ IL-2 activated natural killer cells. Nature 358, 66–70 (1992).

    Article  CAS  Google Scholar 

  6. Kärre, K. NK cells, MHC class I molecules and missing self. Scand. J. Immunol. 55, 221–228 (2002).

    Article  Google Scholar 

  7. Colucci, F., DiSanto, J.P. & Leibson, P. Natural killer cell activation in mice and men: different triggers for similar weapons? Nat. Immunol. 3, 807–813 (2002).

    Article  CAS  Google Scholar 

  8. Cerwenka, A. et al. Retinoic acid early inducible genes define a ligand family for the activating NKG2D receptor in mice. Immunity 12, 721–727 (2000).

    Article  CAS  Google Scholar 

  9. Diefenbach, A., Jamieson, A.N., Liu, S., Shastri, N. & Raulet, D.H. Ligands for the murine NKG2D receptor: expression by tumor cells and activation of NK cells and macrophages. Nat. Immunol. 1, 95–97 (2000).

    Article  Google Scholar 

  10. Diefenbach, A. & Raulet, D.H. Strategies for target cell recognition by natural killer cells. Immunol. Rev. 181, 170–184 (2001).

    Article  CAS  Google Scholar 

  11. Kane, K. Ly-49 mediates EL4 lymphoma adhesion to isolated class I major histocompatibility complex molecules. J. Exp. Med. 179, 1011–1015 (1994).

    Article  CAS  Google Scholar 

  12. Hanke, T. et al. Direct assessment of MHC class I binding by seven Ly49 inhibitory NK cell receptors. Immunity 11, 67–77 (1999).

    Article  CAS  Google Scholar 

  13. Matsumoto, N., Ribaudo, R.K., Abastado, J.P., Margulies, D.H. & Yokoyama, W.M. The lectin-like NK cell receptor Ly-49A recognizes a carbohydrate-independent epitope on its MHC class I ligand. Immunity 8, 245–254 (1998).

    Article  CAS  Google Scholar 

  14. Waldenström, M., Sundbäck, J., Olsson-Alheim, M.Y., Achour, A. & Kärre, K. Impaired MHC class I (H-2Dd)-mediated protection against Ly-49A+ NK cells after amino acid substitutions in the antigen binding cleft. Eur. J. Immunol. 28, 2872–2881 (1998).

    Article  Google Scholar 

  15. Matsumoto, N., Mitsuki, M., Tajima, K., Yokoyama, W.M. & Yamamoto, K. The functional binding site for the C-type lectin-like natural killer cell receptor Ly49A spans three domains of its major histocompatibility complex class I ligand. J. Exp. Med. 193, 147–157 (2001).

    Article  CAS  Google Scholar 

  16. Wang, J. et al. Binding of the natural killer cell inhibitory receptor Ly49A to its major histocompatibility complex class I ligand. J. Biol. Chem. 277, 1433–1442 (2002).

    Article  CAS  Google Scholar 

  17. Karlhofer, F.M., Hunziker, R., Reichlin, A., Margulies, D.H. & Yokoyama, W.M. Host MHC class I molecules modulate in vivo expression of a NK cell receptor. J. Immunol. 153, 2407–2416 (1994).

    CAS  PubMed  Google Scholar 

  18. Olsson, M.Y., Karre, K. & Sentman, C.L. Altered phenotype and function of natural killer cells expressing the major histocompatibility complex receptor Ly-49 in mice transgenic for its ligand. Proc. Natl. Acad. Sci. USA 92, 1649–1653 (1995).

    Article  CAS  Google Scholar 

  19. Held, W., Dorfman, J.R., Wu, M.-F. & Raulet, D.H. Major histocompatibility complex class I dependent skewing of the natural killer cell Ly49 receptor repertoire. Eur. J. Immunol. 26, 2286–2292 (1996).

    Article  CAS  Google Scholar 

  20. Kase, A., Johansson, M.H., Olsson-Alheim, M.Y., Kärre, K. & Höglund, P. External and internal calibration of the MHC class I-specific receptor Ly49A on murine natural killer cells. J. Immunol. 161, 6133–6138 (1998).

    CAS  PubMed  Google Scholar 

  21. Sjöström, A. et al. Acquisition of external major histocompatibility complex class I molecules by natural killer cells expressing inhibitory Ly49 receptors. J. Exp. Med. 194, 1519–1530 (2001).

    Article  Google Scholar 

  22. Zimmer, J., Ioannidis, V. & Held, W. H-2D ligand expression by Ly49A+ natural killer (NK) cells precludes ligand uptake from environmental cells: implications for NK cell function. J. Exp. Med. 194, 1531–1539 (2001).

    Article  CAS  Google Scholar 

  23. Olsson-Alheim, M.Y., Salcedo, M., Ljunggren, H.-G., Kärre, K. & Sentman, C.L. NK cell receptor calibration. Effects of MHC class I induction on killing by Ly49Ahigh and Ly49Alow NK cells. J. Immunol. 159, 3189–3194 (1997).

    CAS  PubMed  Google Scholar 

  24. Held, W., Cado, D. & Raulet, D.H. Transgenic expression of the Ly49A natural killer cell receptor confers class I major histocompatibility complex (MHC)-specific inhibition and prevents bone marrow allograft rejection. J. Exp. Med. 184, 2037–2041 (1996).

    Article  CAS  Google Scholar 

  25. Ioannidis, V., Zimmer, J., Beermann, F. & Held, W. Cre recombinase-mediated inactivation of H-2Dd transgene expression: evidence for partial missing-self recognition by Ly49A NK cells. J. Immunol. 167, 6256–6262 (2001).

    Article  CAS  Google Scholar 

  26. Johansson, M.H., Bieberich, C., Jay, G., Kärre, K. & Höglund, P. Natural killer cell tolerance in mice with mosaic expression of major histocompatibility complex class I molecules. J. Exp. Med. 186, 353–364 (1997).

    Article  CAS  Google Scholar 

  27. Michaelsson, J., Achour, A., Rölle, A. & Kärre, K. MHC class I recognition by NK receptors in the Ly49 family is strongly influenced by the b2-microglobulin subunit. J. Immunol. 166, 7327–7334 (2001).

    Article  CAS  Google Scholar 

  28. Held, W. & Raulet, D.H. Ly49A transgenic mice provide evidence for a major histocompatibility complex-dependent education process in natural killer cell development. J. Exp. Med. 185, 2079–2088 (1997).

    Article  CAS  Google Scholar 

  29. Dorfman, J.R. & Raulet, D.H. Major histocompatibility complex genes determine natural killer cell tolerance. Eur. J. Immunol. 26, 151–155 (1996).

    Article  CAS  Google Scholar 

  30. Moody, A.M. et al. Developmentally regulated glycosylation of the CD8αβ coreceptor stalk modulates ligand binding. Cell 107, 501–512 (2001).

    Article  CAS  Google Scholar 

  31. Daniels, M.A. et al. CD8 binding to MHC class I molecules is influenced by T cell maturation and glyosylation. Immunity 15, 1051–1061 (2001).

    Article  CAS  Google Scholar 

  32. Storkus, W.J., Zeh III, H.J., Salter, R.D. & Lotze, M.T. Identification of T-cell epitopes: rapid isolation of class I-presented peptides from viable cells by mild acid elution. J. Immunother. 14, 94–103 (1993).

    Article  CAS  Google Scholar 

  33. Tormo, J., Natarajan, K., Margulies, D.H. & Mariuzza, R.A. Crystal structure of a lectin-like natural killer cell receptor bound to its MHC class I ligand. Nature 402, 623–631 (1999).

    Article  CAS  Google Scholar 

  34. O'Callaghan, C.A., Cerwenka, A., Willcox, B.E., Lanier, L.L. & Bjorkman, P.J. Molecular competition for NKG2D: H60 and RAE1 compete unequally for NKG2D with dominance of H60. Immunity 15, 201–211 (2001).

    Article  CAS  Google Scholar 

  35. Sentman, C.L., Olsson, M.Y. & Kärre, K. Missing self recognition by natural killer cells in MHC class I transgenic mice: a “receptor calibration model” for how effector cells adapt to self. Semin. Immunol. 7, 109–119 (1995).

    Article  CAS  Google Scholar 

  36. Höglund, P. et al. Host MHC class I gene control of NK cell specificity in the mouse. Immunol. Rev. 155, 11–28 (1997).

    Article  Google Scholar 

  37. Matsumoto, N., Tajima, K., Mitsuki, M. & Yamamoto, K. H-2 allele specificity of the NK cell C-type lectin-like MHC class I receptor Ly49A visualized by soluble Ly49A tetramer. Int. Immunol. 13, 615–623 (2001).

    Article  CAS  Google Scholar 

  38. Shimaoka, M. & Springer, T.A. Therapeutic antagonists and conformational regulation of intergrin function. Nat. Rev. Drug Discov. 2, 703–716 (2003).

    Article  CAS  Google Scholar 

  39. Lowin-Kropf, B. & Held, W. Positive impact of inhibitory Ly49 receptor-MHC class I interaction on NK cell development. J. Immunol. 165, 91–95 (2000).

    Article  CAS  Google Scholar 

  40. Sykes, M. et al. Hematopoietic cells and radioresistant host elements influence natural killer cell differentiation. J. Exp. Med. 178, 223–229 (1993).

    Article  CAS  Google Scholar 

  41. Wu, M.-F. & Raulet, D.H. Class I-deficient hemopoietic cells and nonhemopoietic cells dominantly induce unresponsiveness of natural killer cells to class I-deficient bone marrow cell grafts. J. Immunol. 158, 1628–1633 (1997).

    CAS  PubMed  Google Scholar 

  42. Labelle, J.L. & Truitt, R.L. Characterisation of a murine NKT cell tumor previously described as an acute myelogenous leukemia. Leuk. Lymphoma 43, 1637–1644 (2002).

    Article  CAS  Google Scholar 

  43. Glas, R. et al. Major histocompatibility complex class I-specific and -restricted killing of β2-microglobulin-deficient cells by CD8+ cytotoxic T lymphocytes. Proc. Natl. Acad. Sci. USA 89, 11381–1135 (1992).

    Article  CAS  Google Scholar 

  44. Lowin-Kropf, B., Kunz, B., Schneider, P. & Held, W. A role for the src family kinase Fyn in NK cell activation and the formation of the repertoire of Ly49 receptors. Eur. J. Immunol. 32, 773–782 (2002).

    Article  CAS  Google Scholar 

  45. Wilson, C.S., Moser, J.M., Altman, J.D., Jensen, P.E. & Lukacher, A.E. Cross-recognition of two middle T protein epitopes by immunodominant polyoma virus-specific CTL. J. Immunol. 162, 3933–3941 (1999).

    CAS  PubMed  Google Scholar 

  46. Altman, J.D. et al. Phenotypic analysis of antigen-specific T lymphocytes. Science 274, 94–96 (1996).

    Article  CAS  Google Scholar 

  47. Storkus, W.J., Zeh, H.d., Maeurer, M.J., Salter, R.D. & Lotze, M.T. Identification of human melanoma peptides recognized by class I restricted tumor infiltrating T lymphocytes. J. Immunol. 151, 3719–27 (1993).

    CAS  PubMed  Google Scholar 

  48. Kvist, S., Osterberg, L. & Peterson, P.A. Reactions and crossreactions of a rabbit anti-H2 antigen serum. Scand. J. Immunol. 7, 265–276 (1978).

    Article  CAS  Google Scholar 

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Acknowledgements

We thank Frédéric Levy, Ed Palmer, Olivier Michielin, Jérôme Coudert and Jean-Charles Cerottini for discussions. Supported in part by the Swiss National Science Foundation (W.H. and C.B.), the Swiss Cancer League (W.H.) and the Giorgi-Cavalieri-Foundation (C.B.).

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Correspondence to Werner Held.

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Doucey, MA., Scarpellino, L., Zimmer, J. et al. Cis association of Ly49A with MHC class I restricts natural killer cell inhibition. Nat Immunol 5, 328–336 (2004). https://doi.org/10.1038/ni1043

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