Biochemical characterization of a multiple heavy metal, pesticides and phenol resistant Pseudomonas fluorescens strain
Introduction
Pseudomonas fluorescens belongs to a group of common non-pathogenic saprophytes that colonize soil, water and plant surface environments. Physiological and genetic features of Pseudomonas make them a promising agent for utilization in biotechnology, agriculture and environmental bioremediation applications. The ability to biodegrade hazardous chemical wastes is an interesting feature of P. fluorescens (Appanna and Hamel, 1996, Barathi and Vasudevan, 2003). Heavy metals, pesticides, as well as phenols all pose a serious threat to living systems. They can react with proteins, nucleic acids and phospholipids, and thus arrest cellular proliferation (Frausto da Silva and Williams, 1993).
Environmental pollution by heavy metals as a result of fossil fuel burning and industrial discharges has been increasing. In the case of water bodies, the continued influx of pollution load is aggravated in summers when the water evaporates and thereby increasing metal content. During this process, many bacteria acquire metal tolerance (Ghosh et al., 2000). Moreover, bacteria can also degrade and detoxify a wide variety of hazardous compounds. Many of these bacteria also carry plasmids (Silver and Misra, 1988, Mergeay, 1991). The role of plasmids in Pseudomonas sp. in the biotransformation of certain heavy metals, pesticides and phenolics is also well documented (Rajini-Rani and Mahadevan, 1992, Deshpande et al., 2001, Thakur et al., 2001).
The ability of a genetic marker for transfer from one bacterium to another through conjugation and/or transformation provides a good presumptive evidence for the involvement of plasmid, particularly if the frequency of transfer is high. Moreover, loss of certain genetic markers as a result of treatment of bacterial cell to plasmid curing agents also suggests for the plasmidial nature of the marker (Mesas et al., 2004).
Some heavy metal resistance determinants move from plasmid to chromosome (or in the reverse direction). This makes plasmid encoding heavy metal resistance an important aspect of environmental research. These plasmids can be the source of resistance genes for cloning purpose which have potential use in biotechnology such as the manufacture of biosensors and bioremediation processes (Collard et al., 1994). In view of the above the present paper deals with the biochemical characterization of the P. fluorescens SM1 with particular reference to the probable role of plasmid mediated resistance to major water pollutants.
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Materials
BHC (benzene hexachloride), 2,4-D (2,4-dichlorophenoxyaceticacid), mancozeb, NADPH, sodium azide, 2,4-DNP (2,4-dinitrophenol), agarose, ethidium bromide were purchased from Sigma Chemical Co., USA; cadmium chloride, nickel chloride, copper sulphate, potassium dichromate, resorcinol, phenol, catechol, cresol and calcium chloride were procured from Qualigens, India while chloramphenicol was obtained from Parke Davis, India. All chemicals used were of the highest purity grade.
Isolation of plasmid DNA
The plasmid was isolated from P. fluorescens SM1 strain by the method of Birnboim and Doly (1979). The isolated plasmid was characterized by agarose gel electrophoresis according to the standard procedure (Sambrook et al., 1989). The size estimate of the isolated plasmid was obtained by comparing relative mobility on agarose gel with standard molecular markers (Ohman, 1988).
Curing of SM1 strain
One day old culture of P. fluorescens SM1 strain was allowed to grow overnight in Pseudomonas broth supplemented with
Molecular weight of the plasmid
Agarose gel electrophoretic profiles of plasmid DNA isolated from P. fluorescens SM1 strain along with the marker DNA is shown in Fig. 1. The relative mobility of R-plasmid on agarose gel along with those of marker DNAs of known molecular weight were plotted in Fig. 2. The molecular weight of this plasmid, pSM1 based on the relative mobility vs. molecular weight came out to be approximately 43.6 kb.
Transformation
The transformation frequency of the R-plasmid pSM1 was calculated to be 6.7 × 10−4
Discussion
Several bacteria capable of degrading a wide range of compounds have been isolated (Fulthorpe et al., 1995, McLean and Beveridge, 2001). In most of these organisms, the genes for the degenerative pathways were carried on plasmids (Mondaca et al., 1998, Kulkarni and Chaudhari, 2005). To ascertain whether or not the test toxicants resistance in our isolate was plasmid mediated, we screened the P. fluorescens SM1 strain for the presence of plasmid and certainly found one such plasmid (Fig. 1). Our
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