Analysis of lipopolysaccharides by methanolysis, trifluoroacetylation, and gas chromatography on a fused-silica capillary column
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The baseline resolution of Aldo-monosaccharide enantiomers: Simplified GC–MS analyses using acetal-trifluoroacetyl derivatives for complex samples
2019, Journal of Chromatography B: Analytical Technologies in the Biomedical and Life SciencesCitation Excerpt :This mixture was dried, and an appropriate amount of solvent (usually ethyl acetate) was added before injection into the GC (below): injected amounts were ~0.1–1.0 nmole in volumes of 1–2 μl. In some cases after TFAA derivatization the mixtures were dried and carbon tetrachloride was added, mixed, then the mixtures were re-dried before final solvent addition: this procedure removes a portion of reaction by-products such as trifluoroacetic acid [26,27]. GC–MS analyses were performed with an Agilent 6890 N GC (splitless mode) interfaced to an Agilent 5975B MS (Mass Selective Detector, a quadrupole mass spectrometer in EI mode, 70 eV).
Occurrence and composition of extracellular lipids and polysaccharides in a full-scale membrane bioreactor
2009, Water ResearchCitation Excerpt :Extracellular DNA could be one source for this sugar because DNA accounted for approx. 2% (w/w) in EPS extracted from sludge flocs (data not shown). In general pentoses are relatively rare in microbial EPS (Guezennec et al., 1994) although ribose was found in E. coli K-13 polysaccharide (Bryn and Jantzen, 1982) and in EPS of methanogens (Veiga et al., 1997). It was shown in the present study that ribose is obviously a major component of the low MW fraction of EPS (<10 kDa) in sludge flocs and supernatant but it is not part of the membrane foulants.
The influence of sanitizers on the lipopolysaccharide composition of Escherichia coli O111
2006, International Journal of Food MicrobiologyCitation Excerpt :Subsequent trifluoroacetylation of the LPS was performed according to the method of Bryn and Jantzen (1982).
An integrity assay for a meningococcal type B conjugate vaccine
2004, Analytical BiochemistryCitation Excerpt :Attempts to improve monomer production from various-sized poly- and oligosaccharides under more strenuous hydrolysis conditions led to more degradation and so were abandoned. To maximize liberation while minimizing the degradation to the sialic acid monomer during the depolymerization, an anhydrous hydrolysis with hydrochloric acid in methanol, known as methanolysis, an established procedure for dissociation of polysaccharides [28], was employed. Methanolysis treatment will depolymerize the polysaccharide and generate a stable methyl glycoside at the anomeric carbon.
The obligate predatory Bdellovibrio bacteriovorus possesses a neutral lipid a containing α-D-mannoses that replace phosphate residues. Similarities and differences between the lipid As and the lipopolysaccharides of the wild type strain B. bacteriovorus HD100 and its host-independent derivative HI100
2003, Journal of Biological ChemistryCitation Excerpt :Electron impact was carried out at 70 eV and chemical ionization mass spectra (chemical ionization-MS) were recorded with ammonia as reactant gas (0.1 kilopascal). Sugar Analysis—Qualitative examination of the sugar portion of LPS was performed by methylation (0.5 m HCl/CH3OH, 45 min, 85 °C, and 2 m HCl/CH3OH, 16 h, 85 °C) followed by peracetylation (22). The absolute configuration of the mannose and 2,3-diamino-2,3-dideoxyglucose of the lipid A from B. bacteriovorus HD100 was determined with the acetylated (R)-2-butylglycosides (23).