Skip to main content
Log in

Influence of shrub roots on soil macropores using X-ray computed tomography in a shrub-encroached grassland in Northern China

  • Soils, Sec 5 • Soil and Landscape Ecology • Research Article
  • Published:
Journal of Soils and Sediments Aims and scope Submit manuscript

Abstract

Purpose

The relationship between soil macropore and plant roots warrants special attention because it influences the behavior of water in soil. However, the influence of shrub roots on soil macropores in shrub-encroached grasslands is poorly understood. The objectives of this study were to quantify soil macropores and root architecture in a shrub-encroached grassland in northern China, and to reveal the relationship between shrub roots and soil macropore.

Materials and methods

In this study, treatments were performed that corresponded to three successional states of the shrub C. microphylla L. with three different shrub densities. At each site, three undisturbed soil cores were excavated under the shrub canopies, and a Philips medical scanner was used to simultaneously visualize and quantify the soil and root architectures.

Results and discussion

Strong positive correlations between root volume, length, and surface area and the solid surface/solid volume ratio were found, and greater root growth was noted in more porous soil. The results highlighted that the soil macropore characteristics corresponded well with the root characteristics of the soils for the three treatments. Soil macroporosity and macropore volume increased with increasing shrub root network density. In addition, the influence of plant roots on soil macropores increased with increasing shrub encroachment. The study confirmed that the large number of macropores found in the soils under shrubs was attributed to the great degree of root development there.

Conclusions

The greater degree of macroporosity under shrubs was attributed to the larger root network density, which might cause greater amounts of water to be concentrated in the deep soil layer by macropore flow under shrub patches. The influence of plant roots on soil macropores increased with increasing shrub encroachment.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8

Similar content being viewed by others

References

  • Arsenault JL, Poulcur S, Messier C, Guay R (1995) WinRHlZO™, a root measuring system with a unique overlap correction method. HortScience 30:906

    Article  Google Scholar 

  • Blouin M, Barot S, Roumet C (2007) A quick method to determine root biomass distribution in diameter classes. Plant Soil 290:371–381

    Article  CAS  Google Scholar 

  • Capowiez Y, Pierret A, Moran CJ (2003) Characterisation of the three-dimensional structure of earthworm burrow systems using image analysis and mathematical morphology. Biol Fertil Soils 38:301–310

    Article  Google Scholar 

  • Carminati A, Vetterlein D, Weller U, Vogel HJ, Oswald SE (2009) When roots lose contact. Vadose Zone J 8:805–809

    Article  Google Scholar 

  • Clothier BE, Green SR (1997) Roots: the big movers of water and chemical in soil. Soil Sci 162(8):534–543

    Article  CAS  Google Scholar 

  • Dunkerley D (2000) Hydrologic effects of dryland shrubs: defining the spatial extent of modified soil water uptake rates at an Australian desert site. J Arid Environ 45:159–172

    Article  Google Scholar 

  • Feeney DS, Crawford JW, Daniell T, Hallett PD, Numan N, Ritz K, Rivers M, Young IM (2006) Three-dimensional microorganization of the soil–root–microbe system. Microb Ecol 52(1):151–158

    Article  Google Scholar 

  • FEI (2016) Amira & Avizo 3D software. [WWW Document]. URL. https://www.fei.com/software/amira-avizo/. Accessed date: 1 March 2017

  • Gallardo A, Schlesinger WH (1992) Carbon and nitrogen limitations of soil microbial biomass in desert ecosystems. Biogeochemistry 18:1–17

    Article  CAS  Google Scholar 

  • Grevers MCJ, Jong ED, St Arnaud RJ (1989) The characterization of soil macroporosity with CT scanning. Can J Soil Sci 69(3):629–637

    Article  Google Scholar 

  • Gunde AC, Bera B, Mitra SK (2010) Investigation of water and CO2 (carbon dioxide) flooding using micro-CT (micro-computed tomography) images of Berea sandstone core using finite element simulations. Energy 35:5209–5216

    Article  CAS  Google Scholar 

  • Heijs AWJ, de Lange J, Schoute JFT, Bouma J (1995) Computed tomography as a tool for non-destructive analysis of flow patterns in macroporous clay soils. Geoderma 64:183–196

    Article  Google Scholar 

  • Helliwell JR, Sturrock CJ, Grayling KM, Tracy SR, Flavel RJ, Young IM, Whalley WR, Mooney SJ (2013) Applications of X-ray computed tomography for examining biophysical interactions and structural development in soil systems: a review. Eur J Soil Sci 64:279–297

    Article  CAS  Google Scholar 

  • Hu X, Li ZC, Li XY, Liu Y (2015) Influence of shrub encroachment on CT-measured soil macropore characteristics in the Inner Mongolia grassland of northern China. Soil Tillage Res 150:1–9

    Article  Google Scholar 

  • Hu X, Li ZC, Li XY, Wang P, Zhao YD, Liu LY, Lv YL (2018a) Soil macropore structure under different land uses characterized by x-ray computed tomography in the Qinghai Lake watershed, NE Qinghai-Tibet plateau. Pedosphere 28(3):478–487

    Article  Google Scholar 

  • Hu X, Lyu YL, Liu Y, Li XY, Li ZC, Sun ZT, Cheng YQ, Guo LL, Liu LY (2018b) Exclosure on CT-measured soil macropore characteristics in the Inner Mongolia grassland of northern China. J Soils Sediments 18:718–726

    Article  Google Scholar 

  • Hu X, Li X Y, Wang P, Liu Y, Wu X C, Li Z C, Zhao Y D, Cheng Y Q, Guo L L, Lyu Y L, Liu L Y (2019) Influence of exclosure on CT-measured soil macropores and root architecture in a shrub-encroached grassland in northern China. Soil & Tillage Research 187:21–30

  • Illerhaus B, Onel Y, Goebbels A (2004) Correction techniques for 2D detectors to be used with high energy X-ray sources for CT, part II. In: Developments in X-ray tomography proceedings of the society of photo-optical instrumentation engineers (SPIE) 5535:329–334

  • Jarvis NJ (2007) A review of non-equilibrium water flow and solute transport in soil macropores: principles, controlling factors and consequences for water quality. Eur J Soil Sci 58(3):523–546

    Article  Google Scholar 

  • Johnson MS, Lehmann J (2006) Double-funneling of trees: Stemflow and root-induced preferential flow. Ecoscience 13(3):324–333

    Article  Google Scholar 

  • Katuwal S, Norgaard T, Moldrup P, Lamandé M, Wildenschild D, de Jonge LW (2015) Linking air and water transport in intact soils to macropore characteristics inferred from X-ray computed tomography. Geoderma 237–238:9–20

    Article  CAS  Google Scholar 

  • Kuka K, Illerhaus B, Fox CA, Joschko M (2013) X-ray computed microtomography for the study of the soil-root relationship in grassland soils. Vadose Zone J 12. https://doi.org/10.2136/vzj2013.01.0014

  • Larsbo M, Koestel J, Jarvis N (2014) Relations between macropore network characteristics and the degree of preferential solute transport. Hydrol Earth Syst Sci 18:5255–5269

    Article  Google Scholar 

  • Li XY, Yang ZP, Li YT, Lin H (2009) Connecting ecohydrology and hydropedology in desert shrubs: Stemflow as a source of preferential flow in soils. Hydrol Earth Syst Sci 13:2023–2030

    Article  Google Scholar 

  • Li XY, Hu X, Zhang ZH, Peng HY, Zhang SY, Li GY, Li L, Ma YJ (2013) Shrub hydropedology: preferential water availability to deep soil layer. Vadose Zone J 12(4):1539–1663

    Article  Google Scholar 

  • Luo L, Lin H, Li S (2010a) Quantification of 3D soil macropore networks in different soil types and land uses using computed tomography. J Hydrol 393:53–64

    Article  Google Scholar 

  • Luo L, Lin H, Schmidt J (2010b) Quantitative relationships between soil macropore characteristics and preferential flow and transport. Soil Sci Soc Am J 74:1929–1937

    Article  CAS  Google Scholar 

  • Meijering EHW, Niessen WJ, Pluim JPW, Viergever MA (1999) Quantitative comparison of sinc-approximating kernels for medical image interpolation. In: Medical Image Computing and Computer-Assisted Intervention, MICCAI’99, Proceedings, vol. 1679:210–217

  • Mooney SJ, Morris C (2008) Morphological approach to understanding preferential flow using image analysis with dye tracers and X-ray computed tomography. Catena 73(2):204–211

    Article  Google Scholar 

  • Mooney SJ, Pridmore TP, Helliwell J, Bennett MJ (2012) Developing X-ray computed tomography to non-invasively image 3-D root systems architecture in soil. Plant Soil 352:1–22

    Article  CAS  Google Scholar 

  • Munkholm LJ, Heck RJ, Deen B (2012) Soil pore characteristics assessed from X-ray micro- CT derived images and correlations to soil friability. Geoderma 181–182:22–29

    Article  Google Scholar 

  • Naveed M, Moldrup P, Emmanuel A, Wildenschild D, Edene M, Lamandé M, Vogel HJ, de Jonge LW (2013) Revealing soil structure and functional macroporosity along a clay gradient using x-ray computed tomography. Soil Sci Soc Am J 77:403–411

    Article  CAS  Google Scholar 

  • Peng HY (2012) Spatial pattern of shrub patches and its ecohydrological mechanism at the typical steppe in Inner Mongolia. Unpublished PhD thesis. Beijing Normal University, China, pp 47–48

  • Peng HY, Li XY, Li GY, Zhang H, Zhang S Y, Li L, Zhao GQ, Jiang ZY, Ma YJ (2013) Shrub encroachment with increasing anthropogenic disturbance in the semiarid Inner Mongolian grasslands of China. Catena 109: 39–48

  • Pierret A, Capowiez Y, Moran CJ, Kretzschmar A (1999) X-ray computed tomography to quantify tree rooting spatial distributions. Geoderma 90:307–326

    Article  Google Scholar 

  • Pierret A, Doussan C, Capowiez Y, Bastardie F, Pages L (2007) Root functional architecture: a framework for modeling the interplay between roots and soil. Vadose Zone J 6:269–281

    Article  Google Scholar 

  • Sammartino S, Michel E, Capowiez Y (2012) A novel method to visualize and characterize preferential flow in undisturbed soil cores by using multi-slice helical CT. Vadose Zone J 11(1):vzj2011.0100

    Article  Google Scholar 

  • Schmidt S, Bengough AG, Gregory PJ, Grinev DV, Otten W (2012) Estimating root–soil contact from 3D X-ray microtomographs. Eur J Soil Sci 63:776–786

    Article  Google Scholar 

  • Soil Survey Staff (1987) Keys to soil taxonomy, 3rd edn. Cornell University, Ithaca

    Google Scholar 

  • Stewart JB, Moran CJ, Wood JT (1999) Macropore sheat: quantification of plant root and soil macropore association. Plant Soil 211:59–67

    Article  CAS  Google Scholar 

  • Taina IA, Heck RJ, Elliot TR (2008) Application of X-ray computed tomography to soil science: a literature review. Can J Soil Sci 88(1):1–20

    Article  Google Scholar 

  • Tracy SR, Roberts JA, Black CR, McNeill A, Davidson R, Mooney SJ (2010) The X-factor: visualizing undisturbed root architecture in soils using X-ray computed tomography. J Exp Bot 61:311–313

    Article  CAS  Google Scholar 

  • Tracy SR, Black CR, Roberts JA, Sturrock C, Mairhofer S, Craigon J, Mooney SJ (2012) Quantifying the impact of soil compaction on root system architecture in tomato (Solanum lycopersicum L.) by X-ray micro-computed tomography (CT). Ann Bot 110:511–519

    Article  Google Scholar 

  • Van Schaik NLMB (2009) Spatial variability of infiltration patterns related to site characteristics in a semi-arid watershed. Catena 78:36–47

    Article  Google Scholar 

  • Vogel MN, Goeppert B, Maksimovic O, Brodoefel H, Faul C, Claussen CD, Horger M (2010) CT features of neutropenic enterocolitis in adult patients with hematological diseases undergoing chemotherapy. Fortschr Röntgenstr 182(12):1076–1081

    Article  CAS  Google Scholar 

  • Walkley A, Black IA (1934) An examination of the Degtjareff method for determining soil organic matter and a proposed modification of the chromic acid titration method. Soil Sci 37(1):29–38

    Article  CAS  Google Scholar 

  • Weiler M, Naef F (2003) An experimental tracer study of the role of macropores in infiltration in grassland soils. Hydrol Process 17(2):477–493

    Article  Google Scholar 

  • Wu GL, Liu Y, Yang Z, Cui Z, Deng L, Chang XF, Shi ZH (2017) Root channels to indicate the increase in soil matrix water infiltration capacity of arid reclaimed mine soils. J Hydrol 546:133–139

    Article  Google Scholar 

  • Yanai RD, Eissenstat DM (2002) Coping with herbivores and pathogens: a model of optimal root turnover. Funct Ecol 16(6):865–869

    Article  Google Scholar 

  • Young IM (1998) Biophysical interactions at the root-soil interface: a review. J Agric Sci 130:1–7

    Article  Google Scholar 

  • Zobel RW, Baligar VC, Kinraide TB (2007) Fine root diameters can change in response to changes in nutrient concentrations. Plant Soil 297:243–254

    Article  CAS  Google Scholar 

Download references

Funding

This study was financially supported by National Key R&D Program of China (Grant number: 2016YFA0601901), the National Science Foundation of China (Grant number: 41471018), the PCSIRT (IRT-15R06), the National Key Research and Development Program of China (2016YFE0203400-01), and projects supported by the State Key Laboratory of Earth Surface Processes and Resource Ecology.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Xia Hu.

Additional information

Responsible editor: Lu Zhang

Publisher’s note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Hu, X., Li, XY., Guo, LL. et al. Influence of shrub roots on soil macropores using X-ray computed tomography in a shrub-encroached grassland in Northern China. J Soils Sediments 19, 1970–1980 (2019). https://doi.org/10.1007/s11368-018-2218-6

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11368-018-2218-6

Keywords

Navigation