Skip to main content
Log in

NOESY-WaterControl: a new NOESY sequence for the observation of under-water protein resonances

  • Article
  • Published:
Journal of Biomolecular NMR Aims and scope Submit manuscript

Abstract

Highly selective and efficient water signal suppression is indispensable in biomolecular 2D nuclear Overhauser effect spectroscopy (NOESY) experiments. However, the application of conventional water suppression schemes can cause a significant or complete loss of the biomolecular resonances at and around the water chemical shift (ω2). In this study, a new sequence, NOESY-WaterControl, was developed to address this issue. The new sequence was tested on lysozyme and bovine pancreatic trypsin inhibitor (BPTI), demonstrating its efficiency in both water suppression and, more excitingly, preserving water-proximate biomolecular resonances in ω2. The 2D NOESY maps obtained using the new sequence thus provide more information than the maps obtained with conventional water suppression, thereby lessening the number of experiments needed to complete resonance assignments of biomolecules. The 2D NOESY-WaterControl map of BPTI showed strong bound water and exchangeable proton signals in ω1 but these signals were absent in ω2, indicating the possibility of using the new sequence to discriminate bound water and exchangeable proton resonances from non-labile proton resonances with similar chemical shifts to water.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8

Similar content being viewed by others

References

  • Brown SC, Weber PL, Mueller L (1988) Toward complete 1H NMR spectra in proteins. J Magn Reson 77:166–169

    ADS  Google Scholar 

  • Chakrabarti G, Kim S, Gupta ML, Barton JS, Himes RH (1999) Stabilization of tubulin by deuterium oxide. Biochemistry 38:3067–3072

    Article  Google Scholar 

  • Hoult DI (1976) Solvent peak saturation with single phase and quadrature Fourier transformation. J Magn Reson 21:337–347

    ADS  Google Scholar 

  • Hoult DI, Richards RE (1975) Critical factors in the design of sensitive high resolution nuclear magnetic resonance spectrometers. Proc R Soc Lond A 344:311–340

    Article  ADS  Google Scholar 

  • Hwang TL, Shaka AJ (1995) Water suppression that works. Excitation sculpting using arbitrary wave-forms and pulsed-field gradients. J Magn Reson 112A:275–279

    Article  ADS  Google Scholar 

  • Krishna NR (1976) A method for solvent peak suppression in FTNMR spectra by double resonance. J Magn Reson 22:555–559

    ADS  Google Scholar 

  • Kumar A, Ernst RR, Wüthrich K (1980) A two-dimensional nuclear Overhauser enhancement (2D NOE) experiment for the elucidation of complete proton-proton cross-relaxation networks in biological macromolecules. Biochem Biophys Res Commun 95:1–6

    Article  Google Scholar 

  • Liu M, Mao XA, Ye C, Huang H, Nicholson JK, Lindon JC (1998) Improved WATERGATE pulse sequences for solvent suppression in NMR spectroscopy. J Magn Reson 132:125–129

    Article  ADS  Google Scholar 

  • Momot KI, Kuchel PW (2004) Convection-compensating PGSE experiment incorporating excitation-sculpting water suppression (CONVEX). J Magn Reson 169:92–101

    Article  ADS  Google Scholar 

  • Otting G, Wüthrich K (1989) Studies of protein hydration in aqueous solution by direct NMR observation of individual protein-bound water molecules. J Am Chem Soc 111:1871–1875

    Article  Google Scholar 

  • Otting G, Liepinsh E, Farmer BT II, Wüthrich K (1991a) Protein hydration studied with homonuclear 3D 1H NMR experiments. J Biomol NMR 1:209–215

    Article  Google Scholar 

  • Otting G, Liepinsh E, Wüthrich K (1991b) Protein hydration in aqueous solution. Science 254:974–980

    Article  ADS  Google Scholar 

  • Piotto M, Saudek V, Sklenář V (1992) Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions. J Biomol NMR 2:661–665

    Article  Google Scholar 

  • Sklenář V, Piotto M, Leppik R, Saudek V (1993) Gradient-tailored water suppression for 1H–15N HSQC experiments optimized to retain full sensitivity. J Magn Reson 102A:241–245

    Article  ADS  Google Scholar 

  • Stejskal EO, Schaefer J (1974a) Data routing in quadrature FT NMR. J Magn Reson 13:249–251

    ADS  Google Scholar 

  • Stejskal EO, Schaefer J (1974b) Comparisons of quadrature and single-phase Fourier transform NMR. J Magn Reson 14:160–169

    ADS  Google Scholar 

  • Tanner JE (1970) Use of the stimulated echo in nmr diffusion studies. J Chem Phys 52:2523–2526

    Article  ADS  Google Scholar 

  • Wüthrich K (1986) 2D NMR with biopolymers. In: Bradbury EM, Nicolini C (ed) NMR in the life sciences, 1st edn. Plenum Press, New York, pp 11–22

    Chapter  Google Scholar 

  • Wüthrich K, Otting G, Liepinsh E (1992) Protein hydration in aqueous solution. Faraday Discuss 93:35–45

    Article  ADS  Google Scholar 

  • Zheng G, Stait-Gardner T, Anil Kumar PG, Torres AM, Price WS (2008) PGSTE-WATERGATE: an STE-based PGSE NMR sequence with excellent solvent suppression. J Magn Reson 191:159–163

    Article  ADS  Google Scholar 

  • Zheng G, Torres AM, Price WS (2016) WaterControl: self-diffusion based solvent signal suppression enhanced by selective inversion. Magn Reson Chem. doi:10.1002/mrc.4420

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Gang Zheng.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary material 1 (DOC 56 KB)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Torres, A.M., Zheng, G. & Price, W.S. NOESY-WaterControl: a new NOESY sequence for the observation of under-water protein resonances. J Biomol NMR 67, 233–241 (2017). https://doi.org/10.1007/s10858-017-0100-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10858-017-0100-2

Keywords

Navigation