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Genetic distance among doubled haploid maize lines and their testcross performance under drought stress and non-stress conditions

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Abstract

In contrast to conventional inbreeding that takes up to seven generations to develop inbred lines, the doubled haploid (DH) technology allows production of inbred lines in two generations. The objectives of the present study were to: (a) evaluate testcross performance of 45 doubled haploid lines under drought stress and non-stress conditions (b) estimate heritabilities for grain yield and other traits and (c) to assess the genetic distance and relationship among the DH lines using 163,080 SNPs generated using genotyping-by-sequencing (GBS). The 45 hybrid and five checks were evaluated using a 10 × 5 alpha lattice in six drought stress and nine well-watered environments in Kenya, Uganda, and Tanzania. Differences in trait means between the drought stress and well-watered conditions were significant for all measured traits except for anthesis date. Genetic variances for grain yield, grain moisture, plant height and ear height were high under well-watered environments while genetic variance for anthesis date, root lodging and stalk lodging were high under drought stress environments. Combined analyses across drought stress and well-watered environments showed that ten top hybrids produced 1.6–2.2 t/ha grain yield under well-watered condition and 1–1.4 t/ha under drought stress condition higher than the mean of the commercial checks. Genetic distance between pairwise comparisons of the 38 of the 45 DH lines ranged from 0.07 to 0.48, and the overall average distance was 0.36. Both cluster and principal coordinate analysis using the genetic distance matrix calculated from 163,080 SNPs showed two major groups and the patterns of group was in agreement with their pedigree. Thirteen (13) of the best hybrids are currently in National Performance Trials testing, an important step towards commercialization in Kenya, Tanzania and Uganda.

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Acknowledgments

The research reported in this paper was supported by the Bill and Melinda Gates and the Howard G Buffet Foundations through the Water Efficient Maize for Africa project. The authors would like to thank, Joel Mbithi, Patrick Gichobi, David Karuri and Gabriel Ambani for data collection at the various experimental sites.

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Authors and Affiliations

  1. International Maize and Wheat Improvement Center (CIMMYT), ICRAF House, UN Avenue, Gigiri, Village Market, P.O Box 1041, Nairobi, 00621, Kenya

    Yoseph Beyene, Stephen Mugo, Kassa Semagn, Tadele Tefera, John Gakunga & Andrew Chavangi

  2. National Crops Resources Research Institute (NaCRRI), P.O.Box 7084, Namulonge, Uganda

    Godfrey Asea

  3. Monsanto South Africa (Proprietary) Ltd, Brits, South Africa

    Walter Trevisan & Haron Karaya

  4. International Maize and Wheat Improvement Center (CIMMYT), 12.5 km Peg Mazowe Road, Mount Pleasant, P.O. Box MP163, Harare, Zimbabwe

    Amsal Tarekegne & James Gethi

  5. Ministry of Agriculture, Food Security and Cooperatives, P.O.Box 400, Mbeya, Tanzania

    Barnabas Kiula

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  1. Yoseph Beyene
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  2. Stephen Mugo
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  3. Kassa Semagn
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Correspondence to Yoseph Beyene.

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Beyene, Y., Mugo, S., Semagn, K. et al. Genetic distance among doubled haploid maize lines and their testcross performance under drought stress and non-stress conditions. Euphytica 192, 379–392 (2013). https://doi.org/10.1007/s10681-013-0867-5

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  • DOI: https://doi.org/10.1007/s10681-013-0867-5

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