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Fulfilling Koch’s postulates for beet curly top Iran virus and proposal for consideration of new genus in the family Geminiviridae

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Abstract

Beet curly top Iran virus (BCTIV) is a divergent geminivirus with biological properties similar to those of curtoviruses; however, the virus is distinct from curtoviruses phylogenetically and in its genome organisation. The replication-associated protein is phylogenetically more closely related to those of mastreviruses than to those of curtoviruses whereas the capsid protein shares high amino acid sequence identity (77-83 %) with those of curtoviruses. The 17 BCTIV genomes from Iran share ~77 % pairwise nucleotide sequence identity with spinach curly top Arizona virus (SCTAV) from Arizona, USA, which was characterised recently. To demonstrate the infectivity of the monopartite BCTIV genome and to fulfil Koch’s postulates, an infectious clone was constructed using a dimer of the full-length genome of an isolate from this study – BCTIV-[IR:Neg:B33P:Sug:08]. Agroinoculation with the cloned DNA resulted in the efficient infection of 74 % of sugar beet plants, which resulted in curly top symptoms. The curly top infection of agroinoculated plants was successfully transmitted to 80 % of healthy sugar beet plants by the natural BCTIV vector, Circulifer haematoceps. Since BCTIV and SCTAV share <62 % pairwise nucleotide sequence identity with all other geminiviruses and have unique genome architectures and properties, and since this is coupled with phylogenetic support at the full-genome level and that of it proteins, we propose that they should be re-classified as members of a new genus, “Becurtovirus”, in the family Geminiviridae.

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References

  1. Anisimova M, Gascuel O (2006) Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative. Syst Biol 55:539–552

    Article  PubMed  Google Scholar 

  2. Bennett CW (1971) The curly top disease of sugarbeet and other plants. Am Phytopathol Soc 7:81

    Google Scholar 

  3. Bolok Yazdi HR, Heydarnejad J, Massumi H (2008) Genome characterization and genetic diversity of beet curly top Iran virus: a geminivirus with a novel nonanucleotide. Virus Genes 36:539–545

    Article  Google Scholar 

  4. Boni MF, Posada D, Feldman MW (2007) An exact nonparametric method for inferring mosaic structure in sequence triplets. Genetics 176:1035–1047

    Article  PubMed  CAS  Google Scholar 

  5. Boulton M (2008) Construction of infectious clones for DNA viruses: Masterviruses. In: Foster GD, Johansen IE, Hong Y, Nagy PD (eds) Methods in molecular biology 451, plant virology protocols: from viral sequence to protein function. Humana Press, Totowa, pp 503–523

    Google Scholar 

  6. Briddon RW, Stenger DC, Bedford ID, Stanley J, Izadpanah K, Markham PG (1988) Comparison of a beet curly top virus isolate originating from the old world with those from the new world. Eur J Plant Pathol 104:77–84

    Article  Google Scholar 

  7. Briddon RW, Bedford ID, Tsai JH, Markham PG (1996) Analysis of the nucleotide sequence of the treehopper-transmitted geminivirus, tomato pseudo-curly top virus, suggests a recombinant origin. Virology 219:387–394

    Article  PubMed  CAS  Google Scholar 

  8. Briddon RW, Heydarnejad J, Khosrowfar F, Massumi H, Martin DP, Varsani A (2010) Turnip curly top virus, a highly divergent geminivirus infecting turnip in Iran. Virus Res 152:169–175

    Article  PubMed  CAS  Google Scholar 

  9. Brown JK, Fauquet CM, Briddon RW, Zerbini M, Moriones E, Navas-Castillo J (2011) Geminivirdae. In: King AMQ, Adamas MJ, Carstens EB, Lefkowitz EJ (eds) Virus taxonomy: classification and nomenclature of viruses: Ninth Report of the International Committee on Taxonomy of Viruses. Elsevier Academic Press, San Diego, pp 251–374

  10. Chen LF, Brannigan K, Clark R, Gilbertson RL (2010) Characterization of Curtoviruses associated with curly top disease of tomato in California and monitoring for these viruses in beet leafhoppers. Plant Dis 94:99–108

    Article  CAS  Google Scholar 

  11. Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32:1792–1797

    Article  PubMed  CAS  Google Scholar 

  12. Gibbs MJ, Armstrong JS, Gibbs AJ (2000) Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences. Bioinformatics 16:573–582

    Article  PubMed  CAS  Google Scholar 

  13. Grimsley N, Hohn B, Hohn T, Walden R (1986) Agroinfection, an alternative route for viral-infection of plants by using the Ti plasmid. Proc Natl Acad Sci USA 83:3282–3286

    Article  PubMed  CAS  Google Scholar 

  14. Guindon S, Gascuel O (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696–704

    Article  PubMed  Google Scholar 

  15. Hellens RP, Edwards EA, Leyland NR, Bean S, Mullineaux PM (2000) pGreen: a versatile and flexible binary Ti vector for agrobacterium-mediated plant transformation. Plant Mol Biol 42:819–832

    Article  PubMed  CAS  Google Scholar 

  16. Heydarnejad J, Hosseini Abhari H, Bolok Yazdi HR, Massumi H (2007) Curly top of cultivated plants and weeds and report of a unique curtovirus from Iran. J Phytopathol 155:321–325

    Article  CAS  Google Scholar 

  17. Hosseini Abhari E, Heydarnejad J, Massumi H, Hosseini Pour A, Izadpanah K (2005) Natural hosts, vector and molecular detection of Beet curly top virus (BCTV) in Southeast of Iran. In: The second Asian Conference on Plant Pathology, Singapore, p 62

  18. Ke G (1967) Possible incidence of curly top in Iran a new record. Plant Dis 51:976–977

    Google Scholar 

  19. Klute KA, Nadler SA, Stenger DC (1996) Horseradish curly top virus is a distinct subgroup II geminivirus species with rep and C4 genes derived from a subgroup III ancestor. J Gen Virol 77:1369–1378

    Article  PubMed  CAS  Google Scholar 

  20. Martin D, Rybicki E (2000) RDP: detection of recombination amongst aligned sequences. Bioinformatics 16:562–563

    Article  PubMed  CAS  Google Scholar 

  21. Martin DP, Posada D, Crandall KA, Williamson C (2005) A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints. AIDS Res Hum Retroviruses 21:98–102

    Article  PubMed  CAS  Google Scholar 

  22. Martin DP, Lemey P, Lott M, Moulton V, Posada D, Lefeuvre P (2010) RDP3: a flexible and fast computer program for analyzing recombination. Bioinformatics 26:2462–2463

    Article  PubMed  CAS  Google Scholar 

  23. Posada D, Crandall KA (2001) Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc Natl Acad Sci USA 98:13757–13762

    Article  PubMed  CAS  Google Scholar 

  24. Shepherd DN, Martin DP, Lefeuvre P, Monjane AL, Owor BE, Rybicki EP, Varsani A (2008) A protocol for the rapid isolation of full geminivirus genomes from dried plant tissue. J Virol Methods 149:97–102

    Article  PubMed  CAS  Google Scholar 

  25. Smith JM (1992) Analyzing the mosaic structure of genes. J Mol Evol 34:126–129

    PubMed  CAS  Google Scholar 

  26. Varma A, Malathi VG (2003) Emerging geminivirus problems: A serious threat to crop production. Ann Appl Biol 142:145–164

    Article  CAS  Google Scholar 

  27. Varsani A, Shepherd DN, Dent K, Monjane AL, Rybicki EP, Martin DP (2009) A highly divergent South African geminivirus species illuminates the ancient evolutionary history of this family. Virol J 6:36

    Article  PubMed  Google Scholar 

  28. Zhang YP, Uyemoto JK, Kirkpatrick BC (1998) A small-scale procedure for extracting nucleic acids from woody plants infected with various phytopathogens for PCR assay. J Virol Methods 71:45–50

    Article  PubMed  CAS  Google Scholar 

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Acknowledgments

This study was supported by a grant from Shahid Bahonar University of Kerman, Kerman, Iran, and a University of Cape Town (South Africa) Block grant awarded to Arvind Varsani.

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Correspondence to Jahangir Heydarnejad.

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GenBank accession numbers: JQ707938 – JQ707951.

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Heydarnejad, J., Keyvani, N., Razavinejad, S. et al. Fulfilling Koch’s postulates for beet curly top Iran virus and proposal for consideration of new genus in the family Geminiviridae . Arch Virol 158, 435–443 (2013). https://doi.org/10.1007/s00705-012-1485-6

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  • DOI: https://doi.org/10.1007/s00705-012-1485-6

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