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Functional Genomic Approaches in Plant Research

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Plant Bioinformatics

Abstract

The ultimate goal of the present-day plant breeders is to generate improved versions of crops to achieve food and nutritional security. The timely development of various functional genomic strategies has been instrumental in approaching this century-long goal. Tremendous acceleration in the forward and reverse genetics research is being witnessed owing to the recent developments in next-generation sequencing (NGS) platforms and big data analyses. RNAseq has revolutionized the transcriptomic research and has remarkable role in analyzing splice variants. Similarly, the development of gel-free proteomic platforms has provided the opportunity to study posttranslational modifications (PTMs), deepening the understanding of the proteome . The various targeted and untargeted metabolomic strategies have been handy in unraveling both the global and tissue-specific potential candidate metabolites. Therefore, there is an inevitable need to comprehend various functional genomic strategies to accomplish continuous progress in crop improvement. Hence, the main focus of this chapter is to provide detailed insights into various genomic, proteomic, and metabolomic strategies and their impact in crop improvement.

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Authors and Affiliations

  1. Graduate School of Biotechnology and Ginseng Bank, College of Life Sciences, Kyung Hee University, Yongin, 446-701, Republic of Korea

    Ragavendran Abbai, Ramya Mathiyalagan & Deok Chun Yang

  2. Department of Oriental Medicinal Biotechnology, College of Life Sciences, Kyung Hee University, Yongin, 446-701, Republic of Korea

    Sathiyamoorthy Subramaniyam & Deok Chun Yang

Authors
  1. Ragavendran Abbai
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  2. Sathiyamoorthy Subramaniyam
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  3. Ramya Mathiyalagan
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  4. Deok Chun Yang
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Corresponding authors

Correspondence to Sathiyamoorthy Subramaniyam or Deok Chun Yang .

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Editors and Affiliations

  1. Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia

    Khalid Rehman Hakeem

  2. Department of Microbiology and Molecular Biology, Chungnam National University, Daejeon, Korea (Republic of)

    Adeel Malik

  3. Department of Bioengineering, Faculty of Engineering, Ege University, Bornova, İzmir, Turkey

    Fazilet Vardar-Sukan

  4. Centre for Environmental Studies & Botany Department, Ege University, Bornova, İzmir, Turkey

    Munir Ozturk

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Abbai, R., Subramaniyam, S., Mathiyalagan, R., Yang, D.C. (2017). Functional Genomic Approaches in Plant Research. In: Hakeem, K., Malik, A., Vardar-Sukan, F., Ozturk, M. (eds) Plant Bioinformatics. Springer, Cham. https://doi.org/10.1007/978-3-319-67156-7_8

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