Abstract
New trends in bioremediation are reviewed with the major focus on applications of both synthetic and biological surfactants including high molecular weight bioemulsifiers. The use of eco-friendly biosurfactants is discussed including their applications for removal of heavy metals from soil in addition to traditional organic contaminants. Both success stories and limitations of biosurfactant applications are described on the basis of current literature. Another newly developed technology, the use of enzymes (free or immobilized) instead of/in combination with microorganisms is discussed with respect to removal of both organic contaminants and metals from soil along with addressing the key disadvantage of the enzyme application, which is its high cost. Application of genetically modified organisms, i.e., microorganisms and plants, for soil bioremediation is reviewed focusing on introduction into the environment as well as contained use in closed reactors. Finally, a brief review is provided on the current research and application of biopesticides as promising agents for prevention of soil contamination.
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Acevedo F, Pizzul L, Castillo MP, González ME, Cea M, Gianfreda L, Diez MC (2010) Degradation of polycyclic aromatic hydrocarbons by free and nanoclay-immobilized manganese peroxidase from Anthracophyllum discolor. Chemosphere 80(3):271–278. https://doi.org/10.1016/j.chemosphere.2010.04.022
Al-Tahhan RA, Sandrin TR, Bodour AA, Maier RM (2000) Rhamnolipid-induced removal of lipopolysaccharide from Pseudomonas aeruginosa: effect on cell surface properties and interaction with hydrophobic substrates. Appl Environ Microbiol 66(8):3262–3268. https://doi.org/10.1128/AEM.66.8.3262-3268.2000
Alvarez Yela AC, Tibaquirá Martínez MA, Rangel Piñeros GA, López VC, Villamizar SH, Núñez Vélez VL, Abraham W-R, Vives Flórez MJ, González Barrios AF (2016) A comparison between conventional Pseudomonas aeruginosa rhamnolipids and Escherichia coli transmembrane proteins for oil recovery enhancing. Int Biodeterior Biodegrad 112:59–65. https://doi.org/10.1016/j.ibiod.2016.04.033
Ángeles M-T, Refugio R-V (2013) In situ biosurfactant production and hydrocarbon removal by Pseudomonas putida CB-100 in bioaugmented and biostimulated oil-contaminated soil. Braz J Microbiol 44(2):595–605. https://doi.org/10.1590/S1517-83822013000200040
Anh TM, Dzyadevych SV, Prieur N, Duc CN, Pham TD, Jaffrezic Renault N, Chovelon J-M (2006) Detection of toxic compounds in real water samples using a conductometric tyrosinase biosensor. Mater Sci Eng C 26(2–3):453–456. https://doi.org/10.1016/j.msec.2005.10.025
Bañuelos G, LeDuc DL, Pilon-Smits EAH, Terry N (2007) Transgenic Indian mustard overexpressing selenocysteine lyase or selenocysteine methyltransferase exhibit enhanced potential for selenium phytoremediation under field conditions. Environ Sci Technol 41(2):599–605. https://doi.org/10.1021/es061152i
Bezza FA, Chirwa EMN (2015) Production and applications of lipopeptide biosurfactant for bioremediation and oil recovery by Bacillus subtilis CN2. Biochem Eng J 101:168–178. https://doi.org/10.1016/j.bej.2015.05.007
Bezza FA, Chirwa EMN (2016) Biosurfactant-enhanced bioremediation of aged polycyclic aromatic hydrocarbons (PAHs) in creosote contaminated soil. Chemosphere 144:635–644. https://doi.org/10.1016/j.chemosphere.2015.08.027
Bezza FA, Chirwa EMN (2017) The role of lipopeptide biosurfactant on microbial remediation of aged polycyclic aromatic hydrocarbons (PAHs)-contaminated soil. Chem Eng J 309:563–576. https://doi.org/10.1016/j.cej.2016.10.055
Binod P, Sukumaran RK, Shirke SV, Rajput JC, Pandey A (2007) Evaluation of fungal culture filtrate containing chitinase as a biocontrol agent against Helicoverpa armigera. J Appl Microbiol 103(5):1845–1852. https://doi.org/10.1111/j.1365-2672.2007.03428.x
Bokare V, Murugesan K, Kim Y-M, Jeon J-R, Kim E-J, Chang YS (2010) Degradation of triclosan by an integrated nano-bio redox process. Bioresour Technol 101(16):6354–6360. https://doi.org/10.1016/j.biortech.2010.03.062
Borah SN, Goswami D, Sarma HK, Cameotra SS, Deka S (2016) Rhamnolipid biosurfactant against Fusarium verticillioides to control stalk and ear rot disease of maize. Front Microbiol 7:1505. https://doi.org/10.3389/fmicb.2016.01505
Brissos V, Ferreira M, Grass G, Martins LO (2015) Turning a hyperthermostable metallo-oxidase into a laccase by directed evolution. ACS Catal 5(8):4932–4941. https://doi.org/10.1021/acscatal.5b00771
Bustamante M, Durán N, Diez MC (2012) Biosurfactants are useful tools for the bioremediation of contaminated soil: a review. J Soil Sci Plant Nutr 12(4):667–687. https://doi.org/10.4067/S0718-95162012005000024
Calvo C, Manzanera M, Silva-Castro GA, Uad I, González-López J (2009) Application of bioemulsifiers in soil oil bioremediation processes. Future prospects. Sci Total Environ 407(12):3634–3640. https://doi.org/10.1016/j.scitotenv.2008.07.008
Calvo FJ, Bolckmans K, Belda JE (2012) Biological control-based IPM in sweet pepper greenhouses using Amblyseius swirskii (Acari: Phytoseiidae). Biocontrol Sci Tech 22(12):1398–1416. https://doi.org/10.1080/09583157.2012.731494
Cameotra SS, Singh P (2009) Synthesis of rhamnolipid biosurfactant and mode of hexadecane uptake by Pseudomonas species. Microb Cell Factories 8:16. https://doi.org/10.1186/1475-2859-8-16
Chandler D, Bailey AS, Tatchell GM, Davidson G, Greaves J, Grant WP (2011) The development, regulation and use of biopesticides for integrated pest management. Philos Trans R Soc B 366(1573):1987–1998. https://doi.org/10.1098/rstb.2010.0390
Christofi N, Ivshina IB (2002) Microbial surfactants and their use in field studies of soil remediation. J Appl Microbiol 93(6):915–929. https://doi.org/10.1046/j.1365-2672.2002.01774.x
Christou P, Capell T, Kohli A, Gatehouse JA, Gatehouse AMR (2006) Recent developments and future prospects in insect pest control in transgenic crops. Trends Plant Sci 11(6):302–308. https://doi.org/10.1016/j.tplants.2006.04.001
Chrzanowski Ł, Wick LY, Meulenkamp R, Kaestner M, Heipieper HJ (2009) Rhamnolipid biosurfactants decrease the toxicity of chlorinated phenols to Pseudomonas putida DOT-T1E. Lett Appl Microbiol 48(6):756–762. https://doi.org/10.1111/j.1472-765X.2009.02611.x
Cipollone R, Ascenzi P, Frangipani E, Visca P (2006) Cyanide detoxification by recombinant bacterial rhodanese. Chemosphere 63(6):942–949. https://doi.org/10.1016/j.chemosphere.2005.09.048
Collinge DB, Søgaard Lund O, Thordal-Christensen H (2008) What are the prospects for genetically engineered, disease resistant plants? Eur J Plant Pathol 121(3):217–231. https://doi.org/10.1007/s10658-007-9229-2
Conte P, Agretto A, Spaccini R, Piccolo A (2005) Soil remediation: humic acids as natural surfactants in the washings of highly contaminated soils. Environ Pollut 135(3):515–522. https://doi.org/10.1016/j.envpol.2004.10.006
da Rosa CFC, Freire DMG, Ferraz HC (2015) Biosurfactant microfoam: application in the removal of pollutants from soil. J Environ Chem Eng 3(1):89–94. https://doi.org/10.1016/j.jece.2014.12.008
Daâssi D, Prieto A, Zouari-Mechichi H, Martínez MJ, Nasri M, Mechichi T (2016) Degradation of bisphenol A by different fungal laccases and identification of its degradation products. Int Biodeterior Biodegrad 110:181–188. https://doi.org/10.1016/j.ibiod.2016.03.017
Das P, Mukherjee S, Sen R (2008) Antimicrobial potential of a lipopeptide biosurfactant derived from a marine Bacillus circulans. J Appl Microbiol 104(6):1675–1684. https://doi.org/10.1111/j.1365-2672.2007.03701.x
Datta R, Anand S, Moulick A, Baraniya D, Pathan SI, Rejsek K, Vranova V, Sharma M, Sharma D, Kelkar A, Formanek P (2017) How enzymes are adsorbed on soil solid phase and factors limiting its activity: a review. Int Agrophys 31(2):287–302. https://doi.org/10.1515/intag-2016-0049
de Cássia FS Silva R, Almeida DG, Rufino RD, Luna JM, Santos VA, Sarubbo LA (2014) Applications of biosurfactants in the petroleum industry and the remediation of oil spills. Int J Mol Sci 15(7):12523–12542. https://doi.org/10.3390/ijms150712523
Doty SL, Shang TQ, Wilson AM, Tangen J, Westergreen AD, Newman LA, Strand SE, Gordon MP (2000) Enhanced metabolism of halogenated hydrocarbons in transgenic plants containing mammalian cytochrome P450 2E1. Proc Natl Acad Sci U S A 97(12):6287–6291. https://doi.org/10.1073/pnas.97.12.6287
du Jardin P (2015) Plant biostimulants: definition, concept, main categories and regulation. Sci Hortic 196:3–14. https://doi.org/10.1016/j.scienta.2015.09.021
Eibes G, Arca-Ramos A, Feijoo G, Lema JM, Moreira MT (2015) Enzymatic technologies for remediation of hydrophobic organic pollutants in soil. Appl Microbiol Biotechnol 99(21):8815–8829. https://doi.org/10.1007/s00253-015-6872-y
Elahian F, Reiisi S, Shahidi A, Mirzaei SA (2017) High-throughput bioaccumulation, biotransformation, and production of silver and selenium nanoparticles using genetically engineered Pichia pastoris. Nanomedicine 13(3):853–861. https://doi.org/10.1016/j.nano.2016.10.009
Fava F, Bertin L, Fedi S, Zannoni D (2003) Methyl-β-cyclodextrin-enhanced solubilization and aerobic biodegradation of polychlorinated biphenyls in two aged-contaminated soils. Biotechnol Bioeng 81(4):381–390. https://doi.org/10.1002/bit.10579
Fava F, Berselli S, Conte P, Piccolo A, Marchetti L (2004) Effects of humic substances and soya lecithin on the aerobic bioremediation of a soil historically contaminated by polycyclic aromatic hydrocarbons (PAHs). Biotechnol Bioeng 88(2):214–223. https://doi.org/10.1002/bit.20225
Fernández-Fernández M, Sanromán MÁ, Moldes D (2013) Recent developments and applications of immobilized laccase. Biotechnol Adv 31(8):1808–1825. https://doi.org/10.1016/j.biotechadv.2012.02.013
Fernando Bautista L, Morales G, Sanz R (2010) Immobilization strategies for laccase from Trametes versicolor on mesostructured silica materials and the application to the degradation of naphthalene. Bioresour Technol 101(22):8541–8548. https://doi.org/10.1016/j.biortech.2010.06.042
Galvez LC, Banerjee J, Pinar H, Mitra A (2014) Engineered plant virus resistance. Plant Sci 228:11–25. https://doi.org/10.1016/j.plantsci.2014.07.006
Gianfreda L, Rao MA, Scelza R, de la Luz Mora M (2016) Chapter 6: Role of enzymes in environment cleanup/remediation. In: Dhillon GS, Kaur S (eds) Agro-industrial wastes as feedstock for enzyme production. Academic, San Diego, p 133–155. doi:https://doi.org/10.1016/B978-0-12-802392-1.00006-X
Goettel MS, St Leger RJ, Rizzo NW, Staples RC, Roberts DW (1989) Ultrastructural localization of a cuticle-degrading protease produced by the entomopathogenic fungus Metarhizium anisopliae during penetration of host (Manduca sexta) cuticle. J Gen Microbiol 135:2233–2239
Gohel V, Singh A, Vimal M, Ashwini P, Chhatpar HS (2006) Bioprospecting and antifungal potential of chitinolytic microorganisms. Afr J Biotechnol 5(2):54–72
Hong S-G, Kim BC, Na HB, Lee J, Youn J, Chung S-W, Lee C-W, Lee B, Kim HS, Hsiao E, Kim SH, Kim B-G, Park HG, Chang HN, Hyeon T, Dordick JS, Grate JW, Kim J (2017) Single enzyme nanoparticles armored by a thin silicate network: single enzyme caged nanoparticles. Chem Eng J 322:510–515. https://doi.org/10.1016/j.cej.2017.04.022
Hosseininoosheri P, Lashgari HR, Sepehrnoori K (2016) A novel method to model and characterize in-situ bio-surfactant production in microbial enhanced oil recovery. Fuel 183:501–511. https://doi.org/10.1016/j.fuel.2016.06.035
Huang Q, Zhu J, Qiao X, Cai P, Rong X, Liang W, Chen W (2009) Conformation, activity and proteolytic stability of acid phosphatase on clay minerals and soil colloids from an Alfisol. Colloids Surf B Biointerfaces 74(1):279–283. https://doi.org/10.1016/j.colsurfb.2009.07.031
Huang JL, Liu ZB, Li SY, Xu B, Gong YH, Yang Y, Sun HX (2016) Isolation and engineering of plant growth promoting rhizobacteria Pseudomonas aeruginosa for enhanced cadmium bioremediation. J Gen Appl Microbiol 62(5):258–265. https://doi.org/10.2323/jgam.2016.04.007
Hultberg M, Bengtsson T, Liljeroth E (2010) Late blight on potato is suppressed by the biosurfactant-producing strain Pseudomonas koreensis 2.74 and its biosurfactant. BioControl 55(4):543–550. https://doi.org/10.1007/s10526-010-9289-7
Ji C, Hou JW, Wang K, Zhang YT, Chen V (2016) Biocatalytic degradation of carbamazepine with immobilized laccase-mediator membrane hybrid reactor. J Membr Sci 502:11–20. https://doi.org/10.1016/j.memsci.2015.12.043
Jiménez-T RG, Moliterni E, Rodríguez L, Fernández FJ, Villaseñor J (2011) Feasibility of mixed enzymatic complexes to enhanced soil bioremediation processes. Procedia Environ Sci 9:54–59. https://doi.org/10.1016/j.proenv.2011.11.010
Kawahigashi H, Hirose S, Ohkawa H, Ohkawa Y (2006) Phytoremediation of the herbicides atrazine and metolachlor by transgenic rice plants expressing human CYP1A1, CYP2B6, and CYP2C19. J Agric Food Chem 54(8):2985–2991. https://doi.org/10.1021/jf052610u
Kebeish R, Azab E, Peterhaensel C, El-Basheer R (2014) Engineering the metabolism of the phenylurea herbicide chlortoluron in genetically modified Arabidopsis thaliana plants expressing the mammalian cytochrome P450 enzyme CYP1A2. Environ Sci Pollut Res 21(13):8224–8232. https://doi.org/10.1007/s11356-014-2710-5
Keusgen M, Kloock JP, Knobbe D-T, Jünger M, Krest I, Goldbach M, Klein W, Schöning MJ (2004) Direct determination of cyanides by potentiometric biosensors. Sensors Actuators B Chem 103(1–2):380–385. https://doi.org/10.1016/j.snb.2004.04.067
Khan A, Williams KL, Nevalainen HKM (2004) Effects of Paecilomyces lilacinus protease and chitinase on the eggshell structures and hatching of Meloidogyne javanica juveniles. Biol Control 31(3):346–352. https://doi.org/10.1016/j.biocontrol.2004.07.011
Kolseth A-K, D'Hertefeldt T, Emmerich M, Forabosco F, Marklund S, Cheeke TE, Hallin S, Weih M (2015) Influence of genetically modified organisms on agro-ecosystem processes. Agric Ecosyst Environ 214:96–106. https://doi.org/10.1016/j.agee.2015.08.021
Kotrba P, Najmanova J, Macek T, Ruml T, Mackova M (2009) Genetically modified plants in phytoremediation of heavy metal and metalloid soil and sediment pollution. Biotechnol Adv 27(6):799–810. https://doi.org/10.1016/j.biotechadv.2009.06.003
Kulikowska D, Gusiatin ZM, Bułkowska K, Kierklo K (2015a) Humic substances from sewage sludge compost as washing agent effectively remove Cu and Cd from soil. Chemosphere 136:42–49. https://doi.org/10.1016/j.chemosphere.2015.03.083
Kulikowska D, Gusiatin ZM, Bułkowska K, Klik B (2015b) Feasibility of using humic substances from compost to remove heavy metals (Cd, Cu, Ni, Pb, Zn) from contaminated soil aged for different periods of time. J Hazard Mater 300:882–891. https://doi.org/10.1016/j.jhazmat.2015.08.022
Kurumata M, Takahashi M, Sakamoto A, Ramos JL, Nepovim A, Vanek T, Hirata T, Morikawa H (2005) Tolerance to, and uptake and degradation of 2,4,6-trinitrotoluene (TNT) are enhanced by the expression of a bacterial nitroreductase gene in Arabidopsis thaliana. Z Naturforsch C 60(3–4):272–278. https://doi.org/10.1515/znc-2005-3-412
Lan WS, Gu JD, Zhang JL, Shen BC, Jiang H, Mulchandani A, Chen W, Qiao CL (2006) Coexpression of two detoxifying pesticide-degrading enzymes in a genetically engineered bacterium. Int Biodeterior Biodegrad 58(2):70–76. https://doi.org/10.1016/j.ibiod.2006.07.008
Lau EV, Gan S, Ng HK, Poh PE (2014) Extraction agents for the removal of polycyclic aromatic hydrocarbons (PAHs) from soil in soil washing technologies. Environ Pollut 184:640–649. https://doi.org/10.1016/j.envpol.2013.09.010
Legault EK, James CA, Stewart K, Muiznieks I, Doty SL, Strand SE (2017) A field trial of TCE phytoremediation by genetically modified poplars expressing cytochrome P450 2E1. Environ Sci Technol 51(11):6090–6099. https://doi.org/10.1021/acs.est.5b04758
Li J-L, Chen B-H (2009) Surfactant-mediated biodegradation of polycyclic aromatic hydrocarbons. Materials 2(1):76–94. https://doi.org/10.3390/ma2010076
Liang S, Guan D-X, Li J, Zhou C-Y, Luo J, Ma LQ (2016) Effect of aging on bioaccessibility of arsenic and lead in soils. Chemosphere 151:94–100. https://doi.org/10.1016/j.chemosphere.2016.02.070
Liu M, Cai QX, Liu HZ, Zhang BH, Yan JP, Yuan ZM (2002) Chitinolytic activities in Bacillus thuringiensis and their synergistic effects on larvicidal activity. J Appl Microbiol 93(3):374–379. https://doi.org/10.1046/j.1365-2672.2002.01693.x
Luna JM, Rufino RD, Sarubbo LA (2016) Biosurfactant from Candida sphaerica UCP0995 exhibiting heavy metal remediation properties. Process Saf Environ Prot 102:558–566. https://doi.org/10.1016/j.psep.2016.05.010
Maity JP, Huang YM, Hsu C-M, Wu C-I, Chen C-C, Li C-Y, Jean J-S, Chang Y-F, Chen C-Y (2013) Removal of Cu, Pb and Zn by foam fractionation and a soil washing process from contaminated industrial soils using soapberry-derived saponin: a comparative effectiveness assessment. Chemosphere 92(10):1286–1293. https://doi.org/10.1016/j.chemosphere.2013.04.060
Marecik R, Wojtera-Kwiczor J, Ławniczak Ł, Cyplik P, Szulc A, Piotrowska-Cyplik A, Chrzanowski Ł (2012) Rhamnolipids increase the phytotoxicity of diesel oil towards four common plant species in a terrestrial environment. Water Air Soil Pollut 223(7):4275–4282. https://doi.org/10.1007/s11270-012-1190-9
Martínková L, Veselá AB, Rinágelová A, Chmátal M (2015) Cyanide hydratases and cyanide dihydratases: emerging tools in the biodegradation and biodetection of cyanide. Appl Microbiol Biotechnol 99(21):8875–8882. https://doi.org/10.1007/s00253-015-6899-0
Martins Das Neves LC, Miazaki Ohara Miyamura TT, Junji Kobayashi M, Vessoni Penna TC, Converti A (2007) Production of biosurfactant by a genetically-modified strain of Bacillus subtilis expressing green fluorescent protein. Ann Microbiol 57(3):377–381. https://doi.org/10.1007/BF03175076
Maslin P, Maier RM (2000) Rhamnolipid-enhanced mineralization of phenanthrene in organic-metal co-contaminated soils. Biorem J 4(4):295–308. https://doi.org/10.1080/10889860091114266
Mishra J, Tewari S, Singh S, Arora NK (2015) Biopesticides: where we stand? In: Arora NK (ed) Plant microbes Symbiosis: applied facets. Springer, New Delhi, pp 37–75. https://doi.org/10.1007/978-81-322-2068-8_2
Mulligan CN (2005) Environmental applications for biosurfactants. Environ Pollut 133(2):183–198. https://doi.org/10.1016/j.envpol.2004.06.009
Nagasawa T, Wieser M, Nakamura T, Iwahara H, Yoshida T, Gekko K (2000) Nitrilase of Rhodococcus rhodochrous J1. Eur J Biochem 267(1):138–144. https://doi.org/10.1046/j.1432-1327.2000.00983.x
Naqvi T, Warden AC, French N, Sugrue E, Carr PD, Jackson CJ, Scott C (2014) A 5000-fold increase in the specificity of a bacterial phosphotriesterase for malathion through combinatorial active site mutagenesis. PLoS One 9(4):e94177. https://doi.org/10.1371/journal.pone.0094177
Ncibi MC, Mahjoub B, Gourdon R (2007) Effects of aging on the extractability of naphthalene and phenanthrene from Mediterranean soils. J Hazard Mater 146(1–2):378–384. https://doi.org/10.1016/j.jhazmat.2006.12.032
Ng I-S, Xu F, Zhang X, Ye C (2015) Enzymatic exploration of catalase from a nanoparticle producing and biodecolorizing algae Shewanella xiamenensis BC01. Bioresour Technol 184:429–435. https://doi.org/10.1016/j.biortech.2014.09.079
Ochoa-Loza FJ, Noordman WH, Jannsen DB, Brusseau ML, Maier RM (2007) Effect of clays, metal oxides, and organic matter on rhamnolipid biosurfactant sorption by soil. Chemosphere 66(9):1634–1642. https://doi.org/10.1016/j.chemosphere.2006.07.068
Okamoto S, Eltis LD (2007) Purification and characterization of a novel nitrile hydratase from Rhodococcus sp. RHA1. Mol Microbiol 65(3):828–838. https://doi.org/10.1111/j.1365-2958.2007.05834.x
Pacwa-Płociniczak M, Płaza GA, Piotrowska-Seget Z, Cameotra SS (2011) Environmental applications of biosurfactants: recent advances. Int J Mol Sci 12(1):633–654. https://doi.org/10.3390/ijms12010633
Payne RB, Gentry DM, Rapp-Giles BJ, Casalot L, Wall JD (2002) Uranium reduction by Desulfovibrio desulfuricans strain G20 and a cytochrome c 3 mutant. Appl Environ Microbiol 68(6):3129–3132. https://doi.org/10.1128/aem.68.6.3129-3132.2002
Pei X-H, Zhan X-H, Wang S-M, Lin Y-S, Zhou L-X (2010) Effects of a biosurfactant and a synthetic surfactant on phenanthrene degradation by a sphingomonas strain. Pedosphere 20(6):771–779. https://doi.org/10.1016/s1002-0160(10)60067-7
Pérez-Palacios P, Romero-Aguilar A, Delgadillo J, Doukkali B, Caviedes MA, Rodríguez-Llorente ID, Pajuelo E (2017) Double genetically modified symbiotic system for improved Cu phytostabilization in legume roots. Environ Sci Pollut Res 24(17):14910–14923. https://doi.org/10.1007/s11356-017-9092-4
Pi Y, Chen B, Bao M, Fan F, Cai Q, Ze L, Zhang B (2017) Microbial degradation of four crude oil by biosurfactant producing strain Rhodococcus sp. Bioresour Technol 232:263–269. https://doi.org/10.1016/j.biortech.2017.02.007
Piotrowska-Długosz A (2017) The use of enzymes in bioremediation of soil xenobiotics. In: Hashmi MZ, Kumar V, Varma A (eds) Xenobiotics in the soil environment: monitoring, toxicity and management. Springer, Cham, pp 243–265. https://doi.org/10.1007/978-3-319-47744-2_17
Portet-Koltalo F, Ammami MT, Benamar A, Wang H, Le Derf F, Duclairoir-Poc C (2013) Investigation of the release of PAHs from artificially contaminated sediments using cyclolipopeptidic biosurfactants. J Hazard Mater 261:593–601. https://doi.org/10.1016/j.jhazmat.2013.07.062
Quiquampoix H, Servagent-Noinville S, Baron M-H (2002) Enzyme adsorption on soil mineral surfaces and consequences for the catalytic activity. In: Burns RG, Dick RP (eds) Enzymes in the environment: activity, ecology, and applications. CRC Press, Boca Raton, pp 285–306
Rahmani K, Faramarzi MA, Mahvi AH, Gholami M, Esrafili A, Forootanfar H, Farzadkia M (2015) Elimination and detoxification of sulfathiazole and sulfamethoxazole assisted by laccase immobilized on porous silica beads. Int Biodeter Biodegrad 97:107–114. https://doi.org/10.1016/j.ibiod.2014.10.018
Rashid N-FM, Azemi M-AFM, Amirul A-AA, Wahid MEA, Bhubalan K (2015) Simultaneous production of biopolymer and biosurfactant by genetically modified Pseudomonas Aeruginosa UMTKB-5. Int Proc Chem, Biol Environ Eng 90(3):16–21. https://doi.org/10.7763/ipcbee
Rath BP, Das S, Mohapatra PKD, Thatoi H (2014) Optimization of extracellular chromate reductase production by Bacillus amyloliquefaciens (CSB 9) isolated from chromite mine environment. Biocatal Agric Biotechnol 3(3):35–41. https://doi.org/10.1016/j.bcab.2014.01.004
Rinágelová A, Kaplan O, Veselá AB, Chmátal M, Křenková A, Plíhal O, Pasquarelli F, Cantarella M, Martínková L (2014) Cyanide hydratase from Aspergillus niger K10: overproduction in Escherichia coli, purification, characterization and use in continuous cyanide degradation. Process Biochem 49(3):445–450. https://doi.org/10.1016/j.procbio.2013.12.008
Roy D, Kommalapati RR, Mandava SS, Valsaraj KT, Constant WD (1997) Soil washing potential of a natural surfactant. Environ Sci Technol 31(3):670–675. https://doi.org/10.1021/es960181y
Sánchez-Trujillo MA, Morillo E, Villaverde J, Lacorte S (2013) Comparative effects of several cyclodextrins on the extraction of PAHs from an aged contaminated soil. Environ Pollut 178:52–58. https://doi.org/10.1016/j.envpol.2013.02.029
Scott JG, Michel K, Bartholomay LC, Siegfried BD, Hunter WB, Smagghe G, Zhu KY, Douglas AE (2013) Towards the elements of successful insect RNAi. J Insect Physiol 59(12):1212–1221. https://doi.org/10.1016/j.jinsphys.2013.08.014
Sekhon KK, Khanna S, Cameotra SS (2011) Enhanced biosurfactant production through cloning of three genes and role of esterase in biosurfactant release. Microb Cell Factories 10(1):49. https://doi.org/10.1186/1475-2859-10-49
Sheppard JD, Cooper DG (1990) The effects of a biosurfactant on oxygen transfer in a cyclone column reactor. J Chem Technol Biotechnol 48(3):325–336. https://doi.org/10.1002/jctb.280480308
Singh AK, Cameotra SS (2013) Efficiency of lipopeptide biosurfactants in removal of petroleum hydrocarbons and heavy metals from contaminated soil. Environ Sci Pollut Res 20(10):7367–7376. https://doi.org/10.1007/s11356-013-1752-4
Singh JS, Abhilash PC, Singh HB, Singh RP, Singh DP (2011) Genetically engineered bacteria: an emerging tool for environmental remediation and future research perspectives. Gene 480(1–2):1–9. https://doi.org/10.1016/j.gene.2011.03.001
Sivaperumal P, Kamala K, Rajaram R (2017) Chapter 8: Bioremediation of industrial waste through enzyme producing marine microorganisms. Adv Food Nutr Res 80:165–179. https://doi.org/10.1016/bs.afnr.2016.10.006
Soares dos Santos A, Pereira N Jr, Freire DMG (2016) Strategies for improved rhamnolipid production by Pseudomonas aeruginosa PA1. PeerJ 4:e2078. https://doi.org/10.7717/peerj.2078
Soberón-Chávez G, Maier RM (2011) Biosurfactants: a general overview. In: Soberón-Chávez G (ed) Biosurfactants: from genes to applications. Springer, Berlin/Heidelberg, pp 1–11. https://doi.org/10.1007/978-3-642-14490-5_1
Song W-Y, Ju Sohn E, Martinoia E, Jik Lee Y, Yang Y-Y, Jasinski M, Forestier C, Hwang I, Lee Y (2003) Engineering tolerance and accumulation of lead and cadmium in transgenic plants. Nat Biotechnol 21(8):914–919. https://doi.org/10.1038/nbt850
Sotirova A, Spasova D, Vasileva-Tonkova E, Galabova D (2009) Effects of rhamnolipid-biosurfactant on cell surface of Pseudomonas aeruginosa. Microbiol Res 164(3):297–303. https://doi.org/10.1016/j.micres.2007.01.005
Supakdamrongkul P, Bhumiratana A, Wiwat C (2010) Characterization of an extracellular lipase from the biocontrol fungus, Nomuraea rileyi MJ, and its toxicity toward Spodoptera litura. J Invertebr Pathol 105(3):228–235. https://doi.org/10.1016/j.jip.2010.06.011
Tahseen R, Afzal M, Iqbal S, Shabir G, Khan QM, Khalid ZM, Banat IM (2016) Rhamnolipids and nutrients boost remediation of crude oil-contaminated soil by enhancing bacterial colonization and metabolic activities. Int Biodeterior Biodegrad 115:192–198. https://doi.org/10.1016/j.ibiod.2016.08.010
Tang J, He J, Liu T, Xin X (2017) Removal of heavy metals with sequential sludge washing techniques using saponin: optimization conditions, kinetics, removal effectiveness, binding intensity, mobility and mechanism. RSC Adv 7(53):33385–33401. https://doi.org/10.1039/C7RA04284A
Thatoi H, Das S, Mishra J, Rath BP, Das N (2014) Bacterial chromate reductase, a potential enzyme for bioremediation of hexavalent chromium: a review. J Environ Manag 146:383–399. https://doi.org/10.1016/j.jenvman.2014.07.014
Tietjen T, Wetzel RG (2003) Extracellular enzyme-clay mineral complexes: enzyme adsorption, alteration of enzyme activity, and protection from photodegradation. Aquat Ecol 37(4):331–339. https://doi.org/10.1023/B:AECO.0000007044.52801.6b
Tuomela M, Hatakka A (2011) 6.16 – oxidative fungal enzymes for bioremediation. In: Moo-Young M (ed) Comprehensive biotechnology, 2nd edn. Academic, Burlington, pp 183–196. https://doi.org/10.1016/B978-0-08-088504-9.00370-6
Van Hamme JD, Singh A, Ward OP (2006) Physiological aspects. Part 1 in a series of papers devoted to surfactants in microbiology and biotechnology. Biotechnol Adv 24(6):604–620. https://doi.org/10.1016/j.biotechadv.2006.08.001
van Lenteren JC, Bolckmans K, Köhl J, Ravensberg WJ, Urbaneja A (2018) Biological control using invertebrates and microorganisms: plenty of new opportunities. BioControl 63(1):39–59. https://doi.org/10.1007/s10526-017-9801-4
Wall JD, Krumholz LR (2006) Uranium reduction. Annu Rev Microbiol 60:149–166. https://doi.org/10.1146/annurev.micro.59.030804.121357
Wang P (2006) Nanoscale biocatalyst systems. Curr Opin Biotechnol 17(6):574–579. https://doi.org/10.1016/j.copbio.2006.10.009
Wang WJ, Li YH, Wang HM, Zu YG (2014) Differences in the activities of eight enzymes from ten soil fungi and their possible influences on the surface structure, functional groups, and element composition of soil colloids. PLoS One 9(11):e111740. https://doi.org/10.1371/journal.pone.0111740
Wang ZQ, Li YB, Tan XP, He WX, Xie W, Megharaj M, Wei GH (2017) Effect of arsenate contamination on free, immobilized and soil alkaline phosphatases: activity, kinetics and thermodynamics. Eur J Soil Sci 68(1):126–135. https://doi.org/10.1111/ejss.12397
Wattanaphon HT, Kerdsin A, Thammacharoen C, Sangvanich P, Vangnai AS (2008) A biosurfactant from Burkholderia cenocepacia BSP3 and its enhancement of pesticide solubilization. J Appl Microbiol 105(2):416–423. https://doi.org/10.1111/j.1365-2672.2008.03755.x
Wu CH, Wood TK, Mulchandani A, Chen W (2006) Engineering plant-microbe symbiosis for rhizoremediation of heavy metals. Appl Environ Microbiol 72(2):1129–1134. https://doi.org/10.1128/AEM.72.2.1129-1134.2006
Yan RX, Hou JH, Ding DF, Guan WQ, Wang CY, Wu ZQ, Li MG (2008) In vitro antifungal activity and mechanism of action of chitinase against four plant pathogenic fungi. J Basic Microbiol 48(4):293–301. https://doi.org/10.1002/jobm.200700392
Yang J, Huang X, Tian B, Wang M, Niu Q, Zhang K (2005) Isolation and characterization of a serine protease from the nematophagous fungus, Lecanicillium psalliotae, displaying nematicidal activity. Biotechnol Lett 27(15):1123–1128. https://doi.org/10.1007/s10529-005-8461-0
Yang C, Song C, Mulchandani A, Qiao C (2010) Genetic engineering of Stenotrophomonas strain YC-1 to possess a broader substrate range for organophosphates. J Agric Food Chem 58(11):6762–6766. https://doi.org/10.1021/jf101105s
Yang Z, Zhang Z, Chai L, Wang Y, Liu Y, Xiao R (2016) Bioleaching remediation of heavy metal-contaminated soils using Burkholderia sp. Z-90. J Hazard Mater 301:145–152. https://doi.org/10.1016/j.jhazmat.2015.08.047
Zhang YM, Miller RM (1994) Effect of a Pseudomonas rhamnolipid biosurfactant on cell hydrophobicity and biodegradation of octadecane. Appl Environ Microbiol 60(6):2101–2106
Zhang C, Wang S, Yan Y (2011) Isomerization and biodegradation of beta-cypermethrin by Pseudomonas aeruginosa CH7 with biosurfactant production. Bioresour Technol 102(14):7139–7146. https://doi.org/10.1016/j.biortech.2011.03.086
Zhang R, Xu XJ, Chen WL, Huang QY (2016a) Genetically engineered Pseudomonas putida X3 strain and its potential ability to bioremediate soil microcosms contaminated with methyl parathion and cadmium. Appl Microbiol Biotechnol 100(4):1987–1997. https://doi.org/10.1007/s00253-015-7099-7
Zhang X, Ng I-S, Chang J-S (2016b) Cloning and characterization of a robust recombinant azoreductase from Shewanella xiamenensis BC01. J Taiwan Inst Chem Eng 61:97–105. https://doi.org/10.1016/j.jtice.2016.01.002
Zhong H, Liu Y, Liu Z, Jiang Y, Tan F, Zeng G, Yuan X, Yan M, Niu Q, Liang Y (2014) Degradation of pseudo-solubilized and mass hexadecane by a Pseudomonas aeruginosa with treatment of rhamnolipid biosurfactant. Int Biodeterior Biodegrad 94:152–159. https://doi.org/10.1016/j.ibiod.2014.07.012
Zimmerman AR, Ahn M-Y (2010) Organo-mineral–enzyme interaction and soil enzyme activity. In: Shukla G, Varma A (eds) Soil enzymology. Springer, Berlin/Heidelberg, pp 271–292. https://doi.org/10.1007/978-3-642-14225-3_15
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Halecký, M., Kozliak, E. (2020). Modern Bioremediation Approaches: Use of Biosurfactants, Emulsifiers, Enzymes, Biopesticides, GMOs. In: Filip, J., Cajthaml, T., Najmanová, P., Černík, M., Zbořil, R. (eds) Advanced Nano-Bio Technologies for Water and Soil Treatment. Applied Environmental Science and Engineering for a Sustainable Future. Springer, Cham. https://doi.org/10.1007/978-3-030-29840-1_24
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